Gene Daci_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0122 
Symbol 
ID5745658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp132518 
End bp133696 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content69% 
IMG OID641295184 
Producthistidine kinase 
Protein accessionYP_001561153 
Protein GI160895571 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGG GACTGAGGCC CAACCGCATC TGGGTGCGCT TCGGCCTGTG GATCACGGCC 
ACCGTGCTCA GCACCATTGC CCTGCTGGCC ATCGGCGTGC TGGTGTTCTC GGAGATCCAG
TACCGCGACT TCTACAGCAG CCTGCCGCCG GCCGTGCAGA TCGAGCTGGA CGAACTCAAC
GCGCAGTCGC TGGAAGACAG CCCGCGCGCC ATGCAGATCT ACGGCCAGTA CTGGACGGGC
GATCTGCTGT TCGGCGAGAA ATGGTCCCTG GTCATCGGCC TGCTGGTGTG CCTGCCCTTC
GGGCTGGCCG TGGGCTTCTG GGTGTCTCGC CTGGTGACGC GGCCCCTGGC TTCCATGGTC
GAGGTGGCCA AGCGCGTGGA GCTGGGCGAC TTCAGCGCGC GCGCCCTGCC CGGCAAGGCC
CATGGCGAGA TGGCCGAGAT GGTGGTGGCC TTCAACCGCA TGATCGATTC GCTGGAGACG
CTGGAGGCCG AGCGCCGCGC CACGGCGGCC TCGATCTCGC ACGAGCTGCG CACGCCGCTG
ACCGTGCTGC AGGCGCGCCT GCATGCCATC TGCGACGGCG TCATCGCCGC AGACGACACC
GAGCTGAACA CGCTGCTGTT CCAGGTCGAG CACCTGGGCC GGCTGGTCGG CGACCTGCAC
ACGCTGTCCA TGGCCGATGC CGGCCAGCTG TCGCTGCAAA AGCAGCGCCT GGACCTGGCA
GAACTCGTGG CCGAGACGCT GGACCACCTG CACCCCCAGC TCCTGCAGCA TGGCATGCAG
CTGGAGATGC ACCTGCCCGC GCCCAGTGAC ATCGGCATGG CCGACATCCG TGCCGACGCC
GACCGCATGC GCCAGATCCT CTCCAACCTC GTCAGCAACG CCATCCGCCA TGCGGCCAGC
GGCGCATGGC TGGGCGTGGC GCTGACGGTG GAATCCGATA TCGAAGGCCG TGCCTGGGCC
GTGCTGCGCA TCAGCGATGC CGGCCCCGGC CTGCCCAGCG AGCTGCGCGC CCACCCCTTC
CAGCGCTTTG CCCAGGTGCC CGGCAAGCGC CGCCGCGAGG GCTCGGGCCT GGGCCTGTCC
ATCGTCAAGG CACTGACCGT CTCCCAGGGC GGCAGCGTGG AGGCCGACGA CTCCGAGCAG
GGCGGTGCCC GCTTCACGCT GCGCTTTCCG CGCGTCTGA
 
Protein sequence
MALGLRPNRI WVRFGLWITA TVLSTIALLA IGVLVFSEIQ YRDFYSSLPP AVQIELDELN 
AQSLEDSPRA MQIYGQYWTG DLLFGEKWSL VIGLLVCLPF GLAVGFWVSR LVTRPLASMV
EVAKRVELGD FSARALPGKA HGEMAEMVVA FNRMIDSLET LEAERRATAA SISHELRTPL
TVLQARLHAI CDGVIAADDT ELNTLLFQVE HLGRLVGDLH TLSMADAGQL SLQKQRLDLA
ELVAETLDHL HPQLLQHGMQ LEMHLPAPSD IGMADIRADA DRMRQILSNL VSNAIRHAAS
GAWLGVALTV ESDIEGRAWA VLRISDAGPG LPSELRAHPF QRFAQVPGKR RREGSGLGLS
IVKALTVSQG GSVEADDSEQ GGARFTLRFP RV