| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0109 |
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| Symbol | |
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| ID | 5745645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 115464 |
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| End bp | 119141 |
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| Gene Length | 3678 bp |
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| Protein Length | 1225 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641295171 |
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| Product | fibronectin type III domain-containing protein |
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| Protein accession | YP_001561140 |
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| Protein GI | 160895558 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGG ATACTTTGGA TTGGCGGCAC AAGGCGATTG CAACGGCCTG CCTGGCCCTG
TGTGGCGCTG CATGGTCCGC GCCCTTCACC CCGGGCAACC TGGTGGCCTA CCGCGTGGGC
ACAGGCACGG GCGCCCTGCC TGTGTACCTG GACGAGTACC GCGTGGACGG CACCCTGGTC
CAATCGCTGC CGCTGTCAGG CGGTGCAACG CCGCTGACGG CCAGCAGCAA GGGCTCGGAA
GGCCTGCTCA ACCGCTCGGA CAATGGCCTG TGTCTGGTGG TTCCCGGCTA TGCCGTGGCC
ACCGGTGGCA CCGAGCCCAA CGGCGTCACG GCAGCGGCGG CCCAGCGCGC CGTGGCCGTG
GTGGGGTTCG ACTCCGACGT GAAAAGCCTG CGCCCGCTCG GCACCACGGC TTTCAGCAAG
GACACCATCC GCGGTGCAGC CAGCAGCGAC TGCGGCGCCG TCTGGGCCAG CGGCAAGGGT
ACGGCCACGG CCAACAATGG CGTCTGGCAC GTGGCTGCAG ACGGCACGGG CATCTCCCAA
CTGAACAGCA GCAATGTCCA GGGCCTGGCG GTCGCCGGCG GCCAGTTGAT CGCCGCCATC
AACGGCGGCT CGCTCAACCA GATCGGCACG AATTTGCCGA CCACGGGCAT CCAGACGGCC
CTGCCCCTGG CGGGCCTGAC GCCCTCCACC TACCGCGGCA TCGCCTTCCT GCAACTCGAT
GGCGGCCCCG CCCTGGCGAA CACCGTCTAC GTGGCGGACA ACGATGCCGG CGCCATCCGG
AAATTCCGCC TCTCGATGGA CGGCACCAGC TGGCAGCCCG CAGGCTCCAT TGCCGGCCTG
TCCAAGGTCC ACGGCTTGGC CGCCTTCGAT ACCGGCGGCG GCAATGTGAT GCTGATGGCC
ACCGACACCA CGGGCCGCCT GTACCGCGCC TTCGATCACG GCGGCTACGC CGGCACGCTG
TCGGGCACGG CCGAGTCCAT CGCCGCGCCG CAGGGCGGCG TGTTCTATGG CGTGGCCTGG
GCTCCGCTGG AGACCGTGCC GGCGACCGTG CCCGCCGCCC CCTCCAACCT GGCGGCCACC
CCGGCCGGCA ACCGCGTGAC GGCCGCCTGG GACGCCGTGC CGGGCGCAGC CTACTACGTG
GTGGAGCTGT CGCAGGACAG CTTTGCATCG GTAGCCTCCA CGGCCGTGGC CCTGGGCAAC
AGCCAGGCGC TGGAAGGCCT GCAGCCCGGC AGCTATACGC TGCGCGTGCG CGCCGTCAAC
GGCCTCGGCG GGAGCACGGC TGCAGTGAGC GTGCCTTTCA TGGCCTCGGC CCCGCCGACG
GCCTCGCTGC CCGAACTGAC CGCGTTTTCC GGCGTGGTCG GCGACGCCAA CGACCCGCTG
GCCTCGGCAG GCATCGGCTT CACGGTGCAG GATGCGGGGG GCGCTGGCGG CGTACAGGTC
ACTGCGCGTT CGAGCAACCA GGCCGTGGTG GCCGACGCCG GCCTGGCCGC GTCCAACCAG
GCCGGCAACG CCGTGCTCAG GATCACGCCC ACCGGCGTGG GCTATGCCGA CATCACCGTC
ACGCTGACCA ACGCGGGCGG CGCCTCCGTC AGCCGCACCA TCAAGTACGC GGCCTCGGCC
AACACCGCGG CCAACACCAG CCCGCGCTGG CTGGCCGGGC GCTCGGACGC ATCGACGGCC
ATCGTCATCG ATGCCGCCAC CATGCTTGTG GGCGACGACG AGGCGCCTGC CCAGGATGCC
TCGGGCAATG CGCTGCCGGC CGGCAACTCC TTCTCGGCCT ATGGCCCGGC CGGCGGGCTG
CCCATCAAGC CGCTGATGCT GGACAGGACC GCCCTGGGCC TGGCCGATGC CGCCGCCTGC
ACCGCCCCCG GCCTCACGGG CCTGGACAGC TGCAAGAGCG ACGAGGAAAT GGACATCGAG
GCCAGCTTTG CCCTGGGCAG CCGCGTGTAC GTGGCGGGCT CGCACTCCAA CAACAAGAGC
GGCAAGTCGC GCACCGACCG CTGGCGCCTG GCGGCGATGG ATGTGACCGG CTCCGGCGCC
TCCACGGCAC TGACCACACG AGGCTACTAC CGCTGGCTGC GCGAGGACCT GCGCAGCTGG
GACGCGGCCG CGCATGACGG CCTTGCCGCC AACTACCTGG GCCTGGTGGC CAGCTCGGAC
GGCGGCGCCA CCAAGGCGCC CGAGGCCGAG ACGATGAGCG GCTTTTCCAT CGAAGGCATG
TCCACCAGCC CCGACGACGG CGCCGCATGG CTGGGCTTTC GCGCGCCGCT GGTGCCGGCA
CCGGGCGCGT CGGCCGTCAC GGCCGACGAC GCCACGGGCC GCACGCATGC GCTGATCGTG
CCCGTGACCA ACTTCGCGGC CCTGCCTGCG GCCGATGGCG GCAGCAAGGG CAGCGCCATC
ATGGGCCAGC CGATCCGCCT GGACCTGGGC GGCCGAGGCA TCCGCGAAAT CCGCAAGAAC
GCGGCCGGCG AGTACCTGAT CATTGCCGGT CCCTCGGCCA GCGCCACGGG CACCGCGCCG
CGCAACTTCC AGCTCTATTC CTGGGATGGC CGCGTGAACG GCGCAGGCCT GGCCCTGAAC
CTGCGCCCGC GCGCTGCCGA CCTGGCCGCC ATTACCGTGC CCAATACCGC CTGCTCGGCC
GAAGGCATAG GCGCCATGCC GGCCAGCCTG GACGCAGGCG GCAGCGTGGA CATCATCAGC
GACTGCGGCG ATGCCGATTT CTACGGCGAT GGCACCGCGG CCAAGGACCT GCCCTATGCC
GCCTGGAAAA AGGCGCGCCT GGACAGCCTG GCGGTGCCGG CGCTATCTAC CGTGGCCCTG
ACCGCCCAGG CCGTGGACCA GACATCGGCC GTGGTCCAGG CCACCCCCAG CATGGGCGGC
AGCCTGCGCG CCGTGGCCCT GCCTGCCAAC GCCCCCGTCC CCAGTTGGGA ACAGGTCATG
GCCGGCCTGG ATGCCGCCGG CCTGCCGGCC CCTGCCAGCA ATACGGTCAG CACCGCAGCC
GGCACGGCCG CCACGCTGTC CTTCACGGGC CTGGACCCCG CCGTGAGCTA CCGCGTGCAT
GCGGTCAACC TGCCGGCATC GGGCACGGCC AGCGCGCCGG CTGTGCTGGC GCTGAGCAAG
CCAGTGCCCA TCGGCACGCA GATCGGCACG GGCAGCAATA CGGCGGGCGT GAGCAACGGC
ACCGGCAACG TGGGTGCAGA CCAGTGGCAG TTCGCCTCGA ACTCGGCAGG CTTTCAGCCC
GCGCCCTCGC AAAGCCCGCT GCCGGGCGAC CTGCGCCTGC CCTATGGCAG CCTGAGCTTC
GTGCTCATGG GCGGCACGCC GGGCTCCATG GCCACCATCC GCATGGACCT GCCTGAAGCC
GCACCCGCCC AGGCCACGCT CTGGAAGTAC GGCCCCACGG CCGCCACGCC CACGGCGCAC
TGGTATGAGC TGAGCGCCTC GGCCTACCGC TTCGCACCCG ACCGCCGCTC GGTGAGCTTC
GACATCACCG ACGGGCAGAC GGGAGACAGC GACCTGACCG TCAACGGCGT CATCGTGGAC
CCCGTGGCGG TGGCCGCGCC TGCGGCCCTG CCGCCCGGCG CCACGGCCAC CCCCGTGCCC
GGCCTGTCCA CACTGGCCCA GGCGCTGCTG GCGCTGGTCC TGGGCGGCAT GGCCGCACTG
CGCCGCCGCC GCGGCTGA
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| Protein sequence | MRMDTLDWRH KAIATACLAL CGAAWSAPFT PGNLVAYRVG TGTGALPVYL DEYRVDGTLV
QSLPLSGGAT PLTASSKGSE GLLNRSDNGL CLVVPGYAVA TGGTEPNGVT AAAAQRAVAV
VGFDSDVKSL RPLGTTAFSK DTIRGAASSD CGAVWASGKG TATANNGVWH VAADGTGISQ
LNSSNVQGLA VAGGQLIAAI NGGSLNQIGT NLPTTGIQTA LPLAGLTPST YRGIAFLQLD
GGPALANTVY VADNDAGAIR KFRLSMDGTS WQPAGSIAGL SKVHGLAAFD TGGGNVMLMA
TDTTGRLYRA FDHGGYAGTL SGTAESIAAP QGGVFYGVAW APLETVPATV PAAPSNLAAT
PAGNRVTAAW DAVPGAAYYV VELSQDSFAS VASTAVALGN SQALEGLQPG SYTLRVRAVN
GLGGSTAAVS VPFMASAPPT ASLPELTAFS GVVGDANDPL ASAGIGFTVQ DAGGAGGVQV
TARSSNQAVV ADAGLAASNQ AGNAVLRITP TGVGYADITV TLTNAGGASV SRTIKYAASA
NTAANTSPRW LAGRSDASTA IVIDAATMLV GDDEAPAQDA SGNALPAGNS FSAYGPAGGL
PIKPLMLDRT ALGLADAAAC TAPGLTGLDS CKSDEEMDIE ASFALGSRVY VAGSHSNNKS
GKSRTDRWRL AAMDVTGSGA STALTTRGYY RWLREDLRSW DAAAHDGLAA NYLGLVASSD
GGATKAPEAE TMSGFSIEGM STSPDDGAAW LGFRAPLVPA PGASAVTADD ATGRTHALIV
PVTNFAALPA ADGGSKGSAI MGQPIRLDLG GRGIREIRKN AAGEYLIIAG PSASATGTAP
RNFQLYSWDG RVNGAGLALN LRPRAADLAA ITVPNTACSA EGIGAMPASL DAGGSVDIIS
DCGDADFYGD GTAAKDLPYA AWKKARLDSL AVPALSTVAL TAQAVDQTSA VVQATPSMGG
SLRAVALPAN APVPSWEQVM AGLDAAGLPA PASNTVSTAA GTAATLSFTG LDPAVSYRVH
AVNLPASGTA SAPAVLALSK PVPIGTQIGT GSNTAGVSNG TGNVGADQWQ FASNSAGFQP
APSQSPLPGD LRLPYGSLSF VLMGGTPGSM ATIRMDLPEA APAQATLWKY GPTAATPTAH
WYELSASAYR FAPDRRSVSF DITDGQTGDS DLTVNGVIVD PVAVAAPAAL PPGATATPVP
GLSTLAQALL ALVLGGMAAL RRRRG
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