| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0108 |
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| Symbol | |
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| ID | 5745644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 114610 |
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| End bp | 115290 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641295170 |
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| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit |
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| Protein accession | YP_001561139 |
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| Protein GI | 160895557 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR02305] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTC AGCCCTTTCT CCTGGATGAC GGCCTTGCGC TGGGCACGGT CTACGGCACG
CTGCTCAACC AGCAGGCCAC CGTGCAGCGC CTGTCGCCGC AGTTCGACAG CGCGCCCTAC
AAGGCCGCTC CGCGCGCCCC CGTGCTCTAC CTCAAGCCGC GCAACACCTG GGCACGCGAT
GGCGCTGCGG TGGCCGTGCC GGCCGATCCG GGCGAGGTCC GCGTCGATGC CAGCATCGGC
CTGGTGATCG GCCGCAGCGC CACGCGCGTC AGCGAAGCAA CGGCCCTGGA CCATGTGGCC
GGCTGGCTGA TCGCCAGCGA CCTCACGCTG CCGCACGAGA ACTACTACCG CCCCGCCATC
CGCCAGCGCT GCCGCGACGG TTTCTGCCCG CTGGGCGCTC TCGTTCGCGG CACAGGCTTT
GACGCACAGG CGGCCACGCT CACGGTGTCC ATCAATGGTG AACAGGTCTG GCAGCGCGGC
TTTGCCGACC TGGTGCGCTC GCCCGCAAGG CTGCTGGCCG ACGTGACCGA ATTCATGACG
CTGTCGCCCG GCGACGTGCT GCTGCTGGGC CCGGGCGAGG GCGCGCCGCT GGCGCGGCCC
GGGGACCGCG TGGTCATCGA GGTGCCCGGC CTGGGCCGGC TCACGCATTC GGTGGTGGCA
GAACAGGGAG CAGCAGCATG A
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| Protein sequence | MQIQPFLLDD GLALGTVYGT LLNQQATVQR LSPQFDSAPY KAAPRAPVLY LKPRNTWARD
GAAVAVPADP GEVRVDASIG LVIGRSATRV SEATALDHVA GWLIASDLTL PHENYYRPAI
RQRCRDGFCP LGALVRGTGF DAQAATLTVS INGEQVWQRG FADLVRSPAR LLADVTEFMT
LSPGDVLLLG PGEGAPLARP GDRVVIEVPG LGRLTHSVVA EQGAAA
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