| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0107 |
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| Symbol | |
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| ID | 5745643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 113852 |
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| End bp | 114613 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641295169 |
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| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit |
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| Protein accession | YP_001561138 |
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| Protein GI | 160895556 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR02303] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACG GACGCGTCAT CTTCGAAGGA CAGACCCTGC AGGTCACCGA AGGCCCGCAC
GGACAGGTGC AGTTGCCCGA TGGCCGCCTG GTGGCGGAGA CCGCCGTGCA GTGGCTGCCG
CCGCTGCAGT TCGGCACGGT CTTCGCGCTG GGCCTGAACT ATGCGGACCA TGCCAAGGAA
ATCGCCTTCA ACAAGGCGCC CGAGGAACCG CTGGTCTTCC TCAAGGGCCC GAACACGCTG
AACGGCCACC ACGGCCGCAC GTACCGGCCC GCCGACGTGG CCTACATGCA CTTCGAGTGC
GAGCTGGGCG TGGTCATAGG CAAGACCTGC CGCAACGTGC GCCGCGAGGA TGCCTACAGC
GTGATCGCCG GCTACTGCAC GGCCAACGAC TACGCCATAC GCGACTACCT GGAGAACTTC
TACCGGCCCA ACCTGCGCGT GAAGAACCGC GACGGCGCCA CGCCCGTGGG CCCGTGGTTC
GTCGATGCGG CCGATGTGCC CGACCCCATG AACCTGCGTC TGCGCAGCTG GGTCAACGGC
GAGCTCAAGC AGGACGGCAG CACGCGCGAC ATGGTGCATG ACATCCCCTC GCTGATCGCC
CACCTGTCGG GCTTCATGAC CCTGAACCCC GGCGACCTCA TCCTCACCGG CACGCCCGAC
GGCGTGGCCG ACTCCCGCGT GGGCGACGAG ATCGTCACCG AGATCGAAGG CCTGGGCCGC
CTGGTCAACA CCATCGTCGG CGACGCGCCG GCCGCCTCCT GA
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| Protein sequence | MKHGRVIFEG QTLQVTEGPH GQVQLPDGRL VAETAVQWLP PLQFGTVFAL GLNYADHAKE
IAFNKAPEEP LVFLKGPNTL NGHHGRTYRP ADVAYMHFEC ELGVVIGKTC RNVRREDAYS
VIAGYCTAND YAIRDYLENF YRPNLRVKNR DGATPVGPWF VDAADVPDPM NLRLRSWVNG
ELKQDGSTRD MVHDIPSLIA HLSGFMTLNP GDLILTGTPD GVADSRVGDE IVTEIEGLGR
LVNTIVGDAP AAS
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