| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0087 |
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| Symbol | |
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| ID | 5745623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 95340 |
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| End bp | 97454 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641295150 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_001561119 |
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| Protein GI | 160895537 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.387097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTTTCC CGTCTGGGCT CGCGGGCAGC GCGCGCGTAC CGTGGCCGGT CATGAGCCAT
ACCCCTGCCT TCATCCCCCA GATCCGCCTG TACCAGGACT GGCTGCGCGA GCGCCACGGC
CTGCAGTTCG ACAGCTACGA CGCGCTGTGG CGCTGGTCGG TGACCGACCT GGACGCCTTC
TGGCAAAGCA TCTGGGACTA CAACGCGCTG CAGTCGCCCA CGCCGCACAC GGCCGTGCTG
GAGCGCAACA CCATGCCCGG CGCCCAGTGG TTTCCGGGCG CCCAGATCAA CTACACGCGC
CAGGCGCTGC GCCATGTGGA TGCCGCCCAT GCGGCCGGCA TGCCCGCCGT GGTCAGCCGC
AACGAGACGG GCCGCCACCG CGAACTGTCC TGGCCCGAGC TGCGCCGCCA GGTCGCCGCC
CTGGCCCTGC ACCTGAAGGC CCAGGGCGTG GGCCGCGGCG ACCGCGTGGC TGCCTACCTG
CCCAACATCC CCGAGGCCAT GGTCGCCCTG CTGGCCACGG CCAGCCTGGG CGCCGTCTGG
AGCATCTGCG CGCCCGACAT GGGCACCAAC GCGGTGCTGG ACCGTTTTCG CCAGATCGCG
CCCAAGGCGC TGATCGCCGT CGATGGCGTG CACTACGCCG GGCGCGATAT CGACCGCATG
GCCGTGCTGG CGGAGCTGCG CGCAGGCCTG CCCAGCGTGG AGCATGTGGT CCTTGTGCCC
AACCTGGATC TGCAGGCGAG GCTGGCCGAT GCCGCCGACT ACGGCCAGGT CACGGCGCGC
GACGACGCGG CCACGGCGGC CTTCGAGCCC GAATGGCTGC CCTTCGACCA CCCGCTGTGG
ATCGTCTACT CCAGCGGCAC CACCGGCCTG CCCAAGCCCA TCGTCCACGG CCATGGCGGC
ATGGTGCTGG TGGCCCTGCA GCTCAAGGCC CTGCACAACG ACGTGGGCTG CAGCTACCAC
CCCAACAGCT GGGGCGAGCG CTACCACTGG TACAGCTCCA CGGGGTGGGT GATGTGGAAT
GCCCAGGTCT CGGGCCTGCT GGGCGGCACC ACCTGCGTGA TCTTCGACGG CAGCCCCGGC
GGCAGCAAGG ACAGGCCCGA CTGGGGCGTG CTGTGGCGCT TCGCGGCCGA GACCGGCGTG
ACCAGCTTCG GCTCGGGCGC GGCCTTCTAC GCCAACTGCA TGAAGGCCGG CGTGGACCTG
GCCCAGTGCG GCGACCTGTC GCGCATCCGC AGCCTGGGCA CCACGGGCTC GCCGCTGTCG
CCCGAGGTGC AAAGCTGGGG CACGGCGCAG TTCGCAGGCA TGGGGCGGCC TGACATCTGG
TGGAACAACA TCTCGGGGGG CACCGACTTC GCGGGCGCCT TCATCGGCGG CCACCGCGAG
CTGCCCCAGC AGCCGGGCAT CATGCAGTGC CGCCAGCTGG GCGCGGCCGT GGAGGCCTGG
AACGAGCAGG GCCAGCCCGT CATCGACGAG GTGGGCGAGC TGGTCTGCAC CCAGCCCATC
CCCTCCATGC CGCTGTACCT GTGGGGCGAT GCGGACGGCA AGCGCTACCT GTCCAGCTAC
TTCGACATGT ACCCGGCCGG CCATGGCCGC GCGCCCGGCG GCGGCGACGG CCCCGCCGCC
ATGGGCCCGG TCTGGCGCCA CGGCGACTGG ATACGCATCC TCCCGGAGGG CGGCTGCATC
ATCTACGGCC GCAGCGACGC CACCATCAAC CGCCACGGCC TGCGCATGGG CACCAGCGAG
ATCTACAGCG CCGTCGAGGC CCTGCCCGAA GTGCTGGACT CCATGGTCGT GGACCTCGAA
TACCTGGGCC GCGAAAGCTT CATGCCGCTG TTCGTGGTGC TGCGCCCGGG CGTGGATCTG
GACGACGCCC TGCGCGCCCG CCTGCAGGGC GCCATCCGCC AGGCCCTGTC GCCGCGCTTC
GTGCCCGACG AGATCGTGCA GGTGGCCGAA ATCCCGCGCA CGCTCAGCGG CAAGAAGCAG
GAGCTGCCCA TCAAGAAGCT GATGCTGGGC CAGCCGCTGG ACAAGGTGGT CAACAAGGAG
GCCATGGCCA ACCCGGGCTG CCTGGACTGG TATGTGGGCT TTGCGGCGCA GCATGCCAAG
GCACAGGCCG CCTGA
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| Protein sequence | MAFPSGLAGS ARVPWPVMSH TPAFIPQIRL YQDWLRERHG LQFDSYDALW RWSVTDLDAF
WQSIWDYNAL QSPTPHTAVL ERNTMPGAQW FPGAQINYTR QALRHVDAAH AAGMPAVVSR
NETGRHRELS WPELRRQVAA LALHLKAQGV GRGDRVAAYL PNIPEAMVAL LATASLGAVW
SICAPDMGTN AVLDRFRQIA PKALIAVDGV HYAGRDIDRM AVLAELRAGL PSVEHVVLVP
NLDLQARLAD AADYGQVTAR DDAATAAFEP EWLPFDHPLW IVYSSGTTGL PKPIVHGHGG
MVLVALQLKA LHNDVGCSYH PNSWGERYHW YSSTGWVMWN AQVSGLLGGT TCVIFDGSPG
GSKDRPDWGV LWRFAAETGV TSFGSGAAFY ANCMKAGVDL AQCGDLSRIR SLGTTGSPLS
PEVQSWGTAQ FAGMGRPDIW WNNISGGTDF AGAFIGGHRE LPQQPGIMQC RQLGAAVEAW
NEQGQPVIDE VGELVCTQPI PSMPLYLWGD ADGKRYLSSY FDMYPAGHGR APGGGDGPAA
MGPVWRHGDW IRILPEGGCI IYGRSDATIN RHGLRMGTSE IYSAVEALPE VLDSMVVDLE
YLGRESFMPL FVVLRPGVDL DDALRARLQG AIRQALSPRF VPDEIVQVAE IPRTLSGKKQ
ELPIKKLMLG QPLDKVVNKE AMANPGCLDW YVGFAAQHAK AQAA
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