| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0080 |
|---|
| Symbol | |
|---|
| ID | 5745616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 88493 |
|---|
| End bp | 89251 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641295143 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001561112 |
|---|
| Protein GI | 160895530 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATG CGGCACTGCT TTCGGTGCGC GGCCTCACGC GCCGCTTCGG CGGGCTCACG
GCCGTGGGCG GCGTGGACCT GGACCTGCAC GAGGGCGAGG TCCATGCCGT GATCGGCACC
AACGGCGCGG GCAAGTCCAC CCTGGTCAAC ATGCTCTCGG GCGAACTGGC GGCCAGCGCG
GGGCGCATTG CGCTCGCGGG CCAGGACGTC ACGCGCATGC CCCAGCCCCG GCGCGCGCGT
GCCGGCGTGG GCCGCAGCTA CCAGCGCACC ACCATCTTTC CCGAGTTCTC GGCGCTGGAG
AACTGCCGGC TCGCGGCCCA GGCGCAGATG GCGCTCAGGC CCTGGCAGCT GGGCCTGTCC
GCACAGCGCT GCGCGGCCAG CGTGCGCCAG GCCCATGCGG CCCTGGAGCG TGCGGGCCTG
GCCGGGCAGG CCCAGGCCGT GGCCGGCACG CTGAGCCACG GCGCCAAGCG CCAGCTTGAA
GTGGCCATGT GCCTGGCCAC CGGCCCGCGC GTGCTGCTGC TGGACGAGCC GCTGGCCGGC
ATGGGCGCCG AGGAGACCGA GCGCATGCTG GCCCTGCTGC AGGAGCTCAA GCGCGGCCAT
GCGGTACTGC TGGTCGAGCA CGACATGGAC GCCGTGTTCC GCATCGCCGA CCGCATCACC
GTGATGGTCA ACGGCAGCGT GGTGGCCACG GGCACGCCAG CGCAGATCCG TGTCGATCCC
GTGGTCCGTA CTGCGTATCT GGGAGAAGAC GATGACTGA
|
|---|
| Protein sequence | MADAALLSVR GLTRRFGGLT AVGGVDLDLH EGEVHAVIGT NGAGKSTLVN MLSGELAASA
GRIALAGQDV TRMPQPRRAR AGVGRSYQRT TIFPEFSALE NCRLAAQAQM ALRPWQLGLS
AQRCAASVRQ AHAALERAGL AGQAQAVAGT LSHGAKRQLE VAMCLATGPR VLLLDEPLAG
MGAEETERML ALLQELKRGH AVLLVEHDMD AVFRIADRIT VMVNGSVVAT GTPAQIRVDP
VVRTAYLGED DD
|
|---|
| |