Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0078 |
Symbol | |
ID | 5745614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 86539 |
End bp | 87411 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641295141 |
Product | inner-membrane translocator |
Protein accession | YP_001561110 |
Protein GI | 160895528 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTTG CCACCTTTCT CGTGCAGTGC CTGAACGCCG TCCAGTACGG GCTGCTGCTG TTCCTGCTGG CCTCGGGCCT GACGCTGATC TTCGGGATCA TGGGCGTGAT CAACCTGGCC CATGGCAGCT TCTACATGAT CGGCGCCTAC ATGGCCTTTG CGCTGTCCCC GCTGCTGGGC CAGCACTTCA TCACCATGCT GCTGGCCGGC GTGGCGCTGA CCGTGGTGCT GGGCTATGCG CTGGAGTGGG CCTTCTTCAG CTACCTCTAC GAGCGCGAGC ACCTGCAGCA GGTGCTGATG ACCTTCGGGC TGATCCTGGT GTTCGAGGAG CTGCGCTCGC TGCTGGCGGG CAACGACGTG CATGGCGTGC CGCTGCCCGG CTGGCTGTCG GGCAGCTTCT CGCTGGGCGG GCTCATGAGC TATCCGTGGT ACCGGCTGTT CGCCTCGGGC GTGTGCCTGC TGGTGGCGCT GGCGCTGTAC TGGGTGGTCA ACCGCACGCG CCTGGGAATG ATGGTGCGCG CGGGCGCCAG CAACCGCGAC ATGGTGCGCG GCCTGGGCAT CGACGTGAAG CGCCTGTACC GCATCGTCTT CGCCATCGGC GTGGCGCTGG CGGCACTGGC GGGCATGATC GCCGCGCCCA TGAGTTCGGT CTATCCGGGC ATGGGCGGCA ACGTGCTCAT CATCTGCTTC GTGGTGGTGG TGATCGGCGG CATCGGCTCG ATCACGGGCG CGCTGCTGGC CTCGCTGCTG GTGGGCTTTG TCGATACCTT CGGCAAGCTG TTCTTCCAGG AGCTCAGCGG CATGAGCGTC TACCTGCTGA TGGCGGTGGT GCTGGTGGGG CGGCCCCAGG GCCTGATGGG GCAAAGGAGC TGA
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Protein sequence | MDLATFLVQC LNAVQYGLLL FLLASGLTLI FGIMGVINLA HGSFYMIGAY MAFALSPLLG QHFITMLLAG VALTVVLGYA LEWAFFSYLY EREHLQQVLM TFGLILVFEE LRSLLAGNDV HGVPLPGWLS GSFSLGGLMS YPWYRLFASG VCLLVALALY WVVNRTRLGM MVRAGASNRD MVRGLGIDVK RLYRIVFAIG VALAALAGMI AAPMSSVYPG MGGNVLIICF VVVVIGGIGS ITGALLASLL VGFVDTFGKL FFQELSGMSV YLLMAVVLVG RPQGLMGQRS
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