Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0057 |
Symbol | |
ID | 5745593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 61480 |
End bp | 62070 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641295120 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001561089 |
Protein GI | 160895507 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCTTAT GCCGCATGAT CTCCACCGCC GAGTCGCGCT ACAACCAGTG GGTGCGCGAG CACTACCGAT TCCTGTTGCG CAGCGCCTGG GCGCTGACCG GCTCGCGCGC GCTGGCCGAG GACGTGGTGC AGGACTGCTT CACCAGCGCC TGGCGCTTTC GCCACCAGCT GCGCGAGGCC GCAATGGCGC GGGCCTGGCT GTTCCAGATC ATGCGCCGCC ATGCCTTCCG GCACCTTGCG CCATCGGCCC ATCTGGTCAG CGATGACGAG GCGCTGGACC AGCATCCCGC CCCCACCCCC TCGCCTTCGG CGCTGGACGA CCGGCTCGAC GTGGTCAAGG CGCTGGCGCG CATCGCGCCC ATCCACCGCG AGGTGCTGGT GCTCTATTAC TTCGACGACA TGCCCACGGC CCAGATGGCC GAGGCCCTGG ACATTGCGCC GGGCACGGTG CTGTCGCGCC TGTCACGCGC CCGCGATGCG CTGAAGGCGG CACTGGAGCA GGCCGCCCCG GCGCCTGCTC CAGAGACTGC CAGCGTGATC CCGCTGCGCC CCACCCCGCT GCGCGCCACC CGATACCAAG GCTTGAAATG A
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Protein sequence | MLLCRMISTA ESRYNQWVRE HYRFLLRSAW ALTGSRALAE DVVQDCFTSA WRFRHQLREA AMARAWLFQI MRRHAFRHLA PSAHLVSDDE ALDQHPAPTP SPSALDDRLD VVKALARIAP IHREVLVLYY FDDMPTAQMA EALDIAPGTV LSRLSRARDA LKAALEQAAP APAPETASVI PLRPTPLRAT RYQGLK
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