| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0028 |
|---|
| Symbol | |
|---|
| ID | 5745564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 35334 |
|---|
| End bp | 36152 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641295091 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001561060 |
|---|
| Protein GI | 160895478 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC AGCCCACGGA CAAGGTCCTC GAAATCAACA ACATCGAGGT CATCTACAAC
AAGGTCGTGC AGGCCCTGCG GGGCTTGTCG CTGGCCGTGC CGCGCGGCCA GATCGTGGCG
CTGCTGGGCA GCAACGGCGC GGGCAAGAGC ACCACGCTCA AGGCCGTCTC GGGGCTGCTG
GCGCTGGAGG ACGGCCTGCT GGCCAGCGGC AGCGTGCGCT ACAACGGCCA GTCCACCGCG
CAGTACGCGC CCCAGCAGCT GGTGCGCCTG GGGCTGTCGC ATGTGATGGA GGGCCGGCGC
GTGTTCGAGG ACCTCACGGT GGAGGAAAAC CTCGTGGCCG CCACCTACGC GCTCACGGGC
CGCAATCAAG TCAAGCCCGA CTTCGACCTG GTCTACAGCT ACTTCCCGCG CCTGCATGAG
CGACGCAAAG GCCTGGCCGG CTACCTGTCG GGCGGCGAGC AGCAGATGCT GGCCATTGGC
CGCGCGCTGA TCGCCCAGCC CCAGCTCATG CTGCTGGACG AGCCCTCGCT GGGTCTGGCT
CCGAAGCTGG TGGAGGACAT CTTCACCATC ATCGCGCGCA TCAATGCCGA GCGCGGCACC
TCCATGCTGC TGGTCGAGCA GAACGCCACC GTGGCCCTGG CCGTGGCGCA CAGCGGCTAC
ATCATGGAGA ACGGCAAGAT CGTCATCGAC GGCCCGGCCG AACGCCTGGC CCAGGATGCC
GACGTGCGCG AGTTCTACCT GGGCATGGGT GGTGGCGGCG AGGCAAAAAG TTTTCGCGAC
CTGAAGCACT ACAAGCGCCG CAAGCGCTGG TTGTCATGA
|
|---|
| Protein sequence | MTEQPTDKVL EINNIEVIYN KVVQALRGLS LAVPRGQIVA LLGSNGAGKS TTLKAVSGLL
ALEDGLLASG SVRYNGQSTA QYAPQQLVRL GLSHVMEGRR VFEDLTVEEN LVAATYALTG
RNQVKPDFDL VYSYFPRLHE RRKGLAGYLS GGEQQMLAIG RALIAQPQLM LLDEPSLGLA
PKLVEDIFTI IARINAERGT SMLLVEQNAT VALAVAHSGY IMENGKIVID GPAERLAQDA
DVREFYLGMG GGGEAKSFRD LKHYKRRKRW LS
|
|---|
| |