Gene Daci_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0022 
Symbol 
ID5745558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp28449 
End bp29111 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID641295085 
Producthypothetical protein 
Protein accessionYP_001561054 
Protein GI160895472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCA AAAACACTCA AACGACGCCA TCCAGCTGCC AGAACCACGC AACGGCGCGC 
AAAAATCCAC CAGAACGTTC AGGGCGACCA CAGCGACCAG GACGACCCGC AAGTTTTGCC
GCCGTGCTGC TGGCCGGTGC AGCGGCCGTC CTGCCCCTGG CGGCGCAGGC GCAGTCCACG
CCGGAATCCT CCCCTTCCAT GTACCTGCAA TACGGCGCGG CCGAGCACAG TGCCGACAGC
TGGACCGTGG GCGTCACCGT GCCCTGGCGC AACTGGCGCC ATGCGCTGTG GGGCGGCCAG
CTCAGCGGCT ACTGGGATGT CTGGGGCGCC CGCTGGTCGG CACCGCTGGA GGGTCGCGAT
CGCGGCACCT GGGTCATCGG CGTGAATCCC ACCGTGCGCT GGCGCCCCAG CAACGGGCAG
TCGCCCTGGT TTGCAGAAAC CGGCGTGGGC CTGAGCTGGG CGCTGAACCG TCGCTACGTC
ACGGACGAGA AGGAATTCCC CACGCGCTAC AACTTCGCCA CCCATATCGG CGTGGGCTAC
CTGTTTGGCA GCCAGGGCCA GCATGAGCTG GTGCTGCGGC TGGAGCACCA TTCCAACGCA
GGCATCAAGA AACCCAACCC CGGCGAAAAC TTCCTGCAGC TGCGCTACGC CCACCATTTC
TGA
 
Protein sequence
MAPKNTQTTP SSCQNHATAR KNPPERSGRP QRPGRPASFA AVLLAGAAAV LPLAAQAQST 
PESSPSMYLQ YGAAEHSADS WTVGVTVPWR NWRHALWGGQ LSGYWDVWGA RWSAPLEGRD
RGTWVIGVNP TVRWRPSNGQ SPWFAETGVG LSWALNRRYV TDEKEFPTRY NFATHIGVGY
LFGSQGQHEL VLRLEHHSNA GIKKPNPGEN FLQLRYAHHF