Gene Daci_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0021 
SymboldinG 
ID5745557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp24810 
End bp26888 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content68% 
IMG OID641295084 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_001561053 
Protein GI160895471 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCC AGATCGCGCA GACCTTCAGC CAGGCCCAGC TGGGAAAAAT CGATGAGGGC 
GCACCGGAGC CCACCCGGTC CATTGCCGTG GTGCAGGCCG GAACGGGGGT GGGCAAATCG
CTGGCGTACA GCATTCCCGC CATTTCGATG GCGCTGGCGC GCGGCACCCG GGTGCTGATT
TCCACGGCCA CCGTCGCCCT GCAGGAACAG CTGGTGAACA AGGATCTGCC CGCGCTGGCC
CAGCAGCTGG AGCAGCCCTT CAAATTCGCG CTGGCCAAGG GGCGGGGCCG CTTTGTCTGC
AAGCTCAAGC TGGAGCGGCT GGCCAGCACC GGCGAGGCCC AGGACGAGGA TCTGGACGAT
CTGTTCGCCG AAGAAAAGGC GCAGGCCCAA AGCCGCGTGG CACGCCCGGC CCAGGAGCTG
GAGGCGCGCA TGCAGTTCTA CAAAAGCATG GCCAATGCGC TGGCGTCCCA GGCCTGGGAC
GGCGACCGCG ACTCTCTGGA GACCCCGCCC GAGGCCGAGG CCTGGAGCCC CGTGGCGGCC
GAATCCTCGT CCTGCACCGG CAAGCACTGC CCGGCCTTCA GCAACTGCGT CTACTACGAG
CGCCGCAAGG ACCTGGTGGC CGCCCAGGTC ATCGTGGCCA ACCACGATCT GCTGCTGTCC
TCCCTGGGCG CGCGGCTGCT GCCCGAGCTG GACAACTGCC TGCTGGTGCT GGACGAAGCC
CACCATCTGC CCGCCACGGC GCTGGGCCAA TTCGCCGGCG AGATGGACCT GAGCCGCCTG
GGCTGGATAG ACAAGCTGAC CAGCCGCGCC CTGCGCGTGA ATACCCTGGT CGAAGTGGAG
GAACTGGCCG ATCTGCCCAG CCATGCCAGC CAGTTGCGCC AGCAGCTGCA GGAACTGGCG
CGCCTGGTGA TGGAGCTGTA CGGCGATACG CTCAAGTCGC AAAAGGACAG CTGGGGGCCG
GCGCGGGTGC GCGCACCGCG CGGCATGCTG CCCGAGCCCC TGCTGGAGCC TCTGGGCAAG
GCCGCCCACC ATGCCAACAG CTTTCTGGAT GCGCTGCGTG CCATCTCCAA GGCACTGCGC
GCCGCCATCA AGGACAATCC AGAGGAAGCA CGCAGGCTGT CTACAGCTTA TGCACAGGTT
GGCGCACTGG CTCCCCGCCT GGAATCCGTC TATGACACGG CCCAGCTGCT GATGCAGCAG
CCAGCGCAGG ATGACGACAG CAGCCGCGTT CCCAATGCCA AATGGTTCAC GTTGGAGACA
GATGGCGAGT ACATCGTGGT CAAGGCCCAT GCCAGCCCCA TCCTGCCCGG AGCCACGCTG
CGCCACCATC TGTGGTCCCA GGTGCGCGGT GCCGTGCTCA CGTCGGCCAC CCTGACCAGC
TGTGGACAAT TCGACTTCTT TTTGCGCGAG GCAGGCCTGC ACGACGATGC GGCCGTGACC
ACGCTGGAAG TGCCCAGCCC CTTCGACTAC GCGCGCCAGG GCACCCTGGT GGCGCGCGAA
ACCGTGGCCG ACCCCAAGGA GGCCGCCCGC TTCACCCAGG AGATGGTGGA CGCGCTGCTG
GGCGACCTGT CCCACGTGCA GGCCGGCGCC CTGGTGCTGT TCACCTCGCG CGAGCAGATG
CGCCTGGCGG TGGATGCGCT GTCCACGGCC ATGCGCTCGC AGGTGCTGGT GCAGACGGCC
ATGCCCCGCG CCCTGCTGCT GGCCCGCCAC CGCGACGCCG TGGAGATGGG CGAGCCCTCC
ATCATCTTCG GCATGCAGTC CTTCGGCGAG GGCCTGGACC TGCCCGGCGC GCTGTGCGAG
TCCCTGTTCA TCACCAAGCT GCCCTTTGCC CCGCCCGATG ACCCCGTGGG CGAGGCCCGG
GCCGAATGGC TGCGCAGCAG CGGCCGCAAC CCCTTCAATG AGCTGGTGGT GCCGGCCACG
GCGATCCGCC TGGCCCAGTG GGTGGGCCGC GCCATACGCA CCGAGGAAGA CCAGGCCCAT
GTGTATTGCT ATGACCGGCG CCTGGTGAAC ACCAGCTATG GCCAGCAGTT GCTCAAGGGC
CTGCCGCCCT TTGCCTTGCA GCGCCGCCCG GCACGCTGA
 
Protein sequence
MAAQIAQTFS QAQLGKIDEG APEPTRSIAV VQAGTGVGKS LAYSIPAISM ALARGTRVLI 
STATVALQEQ LVNKDLPALA QQLEQPFKFA LAKGRGRFVC KLKLERLAST GEAQDEDLDD
LFAEEKAQAQ SRVARPAQEL EARMQFYKSM ANALASQAWD GDRDSLETPP EAEAWSPVAA
ESSSCTGKHC PAFSNCVYYE RRKDLVAAQV IVANHDLLLS SLGARLLPEL DNCLLVLDEA
HHLPATALGQ FAGEMDLSRL GWIDKLTSRA LRVNTLVEVE ELADLPSHAS QLRQQLQELA
RLVMELYGDT LKSQKDSWGP ARVRAPRGML PEPLLEPLGK AAHHANSFLD ALRAISKALR
AAIKDNPEEA RRLSTAYAQV GALAPRLESV YDTAQLLMQQ PAQDDDSSRV PNAKWFTLET
DGEYIVVKAH ASPILPGATL RHHLWSQVRG AVLTSATLTS CGQFDFFLRE AGLHDDAAVT
TLEVPSPFDY ARQGTLVARE TVADPKEAAR FTQEMVDALL GDLSHVQAGA LVLFTSREQM
RLAVDALSTA MRSQVLVQTA MPRALLLARH RDAVEMGEPS IIFGMQSFGE GLDLPGALCE
SLFITKLPFA PPDDPVGEAR AEWLRSSGRN PFNELVVPAT AIRLAQWVGR AIRTEEDQAH
VYCYDRRLVN TSYGQQLLKG LPPFALQRRP AR