| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0003 |
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| Symbol | |
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| ID | 5745539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2865 |
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| End bp | 5444 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641295066 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_001561035 |
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| Protein GI | 160895453 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.202279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG AGAACAAGCC AGAAAACCAG ACCATTGCCC CCGAAGGCTC AGACTCCAGC
GGCTATGGCG AAGGCGCGAT CCAGATCCTC GAAGGCCTGG AGGCCGTGCG CAAGCGCCCC
GGCATGTACA TCGGCGATAC CTCCGATGGC ACGGGCCTGC ACCACCTGGT CTTCGAAGTG
GTGGACAACT CCATCGACGA AGCCCTGGCC GGCTACTGCG ACGACATCCT GGTCACCATC
CATGCCGATG GCTCCCTGTC CGTCATCGAC AACGGCCGCG GCATCCCCAC GCGCGTGAAG
ATGGACGACA AGCACGAGCC CAAGCGCTCG GCGGCCGAGA TCGCCCTCAC CGAACTGCAC
GCGGGCGGCA AGTTCAACCA GAACAGCTAC AAGGTCTCGG GCGGCCTGCA CGGCGTGGGC
GTGTCCTGCG TGAACGCGCT GTCCATCTGG CTCAAGCTCA ACGTGCGCCG CGATGGCGAG
GTCTACGAAA TCGACTTCTC GCGCGGCCAC GTGCAGAACC GCCCGATCGA GATCGTGGAC
GGCGTCGAGG TCTCGCCCAT GCGCGTGGTC GGCAAGAGCG ACAAGCGCGG CACCAAGGTC
CACTTCCTGC CCGACACGGA AATCTTCACG CAGAACCATG AGTTCCGCTA CGAGATCCTG
GCCAAGCGCC TGCGCGAACT GTCCTTCCTG AACAACGGCG TGCGCATCCG CCTCAAGGAC
GAGCGCGACG GCCGCGAAGA CGACTTCTCC GGCGCCGGCG GCGTCATGGG ATTCGTGCAG
TTCATCAACG CCAACAAGAA GGTGCTGCAT CCCACGGCCT TCCACGCCAA CGGCACGCGT
CCTGCGGAAA GCTACGGCGG CATCCCCGGC ACCGAGATCG GCGTCGAAGT CGCCATGCAG
TGGAACGACA GCTATGCCGA GCAGGTGCTG TGCTTCACCA ACAACATCCC GCAACGCGAC
GGCGGCACCC ACCTGACGGG CCTGCGCGCC GCCATGACGC GCGTGATCGG CAAGTACATC
GAGCAGAACG AACTGGCCAA GAAGGCCAAG GTCGAGGTCA GCGGCGACGA CATGCGCGAA
GGCCTGTGCT GCGTGCTGTC CGTCAAGGTG CCCGAACCCA AGTTCAGCAG CCAGACCAAG
GACAAGCTGG TCTCCAGCGA AGTGCGCGCG CCCGTGGAGG ACATCGTCGC CAAGGCGCTG
ACCGACTACC TGGAAGAAAA GCCCAACGAC GCCAAGATCC TGTGCAGCAA GATCGTCGAT
GCCGCGCGTG CCCGCGAGGC CGCGCGCAAG GCCCGCGAGA TGACGCGCCG CAAGGGCGTG
CTCGACGGCA TGGGCCTGCC CGGCAAGCTG GCCGACTGCC AGGAAAAAGA CCCGGCGCTG
TGCGAGATCT ACATCGTCGA GGGTGACTCC GCCGGCGGCT CCGCCAAGCA AGGGCGCGAC
CGCAAGTTCC AGGCCATCCT GCCGCTGCGC GGCAAGATCC TGAACGTGGA AAAGGCCCGC
TACGAAAAGC TGCTGACCAG CAACGAAATC GTCACCCTGA TCACGGCCCT GGGCACCGGC
ATCGGCAAGG CCACGGCCGA ATCGGGCAAG AGCGGCAGCG ACGACTTCGA CCCCAACAAG
CTGCGCTACC ACCGCATCAT CATCATGACC GACGCGGACG TGGACGGCGC CCACATCCGC
ACCCTGCTGC TGACCTTCTT CTACCGCCAG ATGCCGGACC TGGTCGAGCG CGGCCACATC
TACATCGCCC AGCCGCCGCT GTACAAGGTC AAGAACGGCA AGGAAGAGCT GTACATCAAG
GACGGCCCCG CGCTCAACCA GTACCTGCTG CGCATCGCGC TGATGAACGC CAGCGTCAGC
ACCGGCGGTG CCAACCCGCG CACGCTGGAC GGCGAGGAAC TGGCCAAGCT GGCCAACATG
CACCTGGCTG CCGAGACCGT CATCGACCGT CTGTCCAACT TCATGGATGC CGAGGCCCTG
CGCGCCATCG CCGACGGCGT GCAGATCACG CTGGACAGCA TCGAGGCGGC ACAGGCCTGT
GCCCCCATCC TGGAGGCCAA GCTGCGCGAG TTGACCACCA CGGGCGTGCC CGCCGAGGTC
ACGGCCGAAA TCGATCCAGT CTCCGAAAAG CCCGTGCTGC GCATCAGCCG CCACCACCAC
GGCAACATCA AGAGCTCCAT CCTCACCCAG GAGTTCGTGC GCAGCCACGA CTACGCCGCG
CTGGCCGACG AAGCCCAGAA CTTCAACGGC CTGCTGGGCG AAGGCGCCAA GGTCACGCGT
GGCGAAGGCG AAAAGGCCAA GAGCGACAAG GCCGGCGACT TCCGCCAGGC CATGCAATGG
CTGCTGCACG AGGCCGAACG CACCACGGCC CGCCAGCGCT ACAAGGGCCT GGGCGAAATG
AACCCCGAGC AGCTGTGGGA AACCACAATG GACCCCACCG TCCGCAGCCT GCTGCAGGTG
CAGATCGGCG ACGCCATCGA GGCCGACCGC GTGTTCACCA TGCTCATGGG CGATGAAGTG
GAGCCACGCC GGGAATTCAT CGAGACGAAT GCGCTGCGGG CGGGCAATAT CGACGTGTGA
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| Protein sequence | MTDENKPENQ TIAPEGSDSS GYGEGAIQIL EGLEAVRKRP GMYIGDTSDG TGLHHLVFEV
VDNSIDEALA GYCDDILVTI HADGSLSVID NGRGIPTRVK MDDKHEPKRS AAEIALTELH
AGGKFNQNSY KVSGGLHGVG VSCVNALSIW LKLNVRRDGE VYEIDFSRGH VQNRPIEIVD
GVEVSPMRVV GKSDKRGTKV HFLPDTEIFT QNHEFRYEIL AKRLRELSFL NNGVRIRLKD
ERDGREDDFS GAGGVMGFVQ FINANKKVLH PTAFHANGTR PAESYGGIPG TEIGVEVAMQ
WNDSYAEQVL CFTNNIPQRD GGTHLTGLRA AMTRVIGKYI EQNELAKKAK VEVSGDDMRE
GLCCVLSVKV PEPKFSSQTK DKLVSSEVRA PVEDIVAKAL TDYLEEKPND AKILCSKIVD
AARAREAARK AREMTRRKGV LDGMGLPGKL ADCQEKDPAL CEIYIVEGDS AGGSAKQGRD
RKFQAILPLR GKILNVEKAR YEKLLTSNEI VTLITALGTG IGKATAESGK SGSDDFDPNK
LRYHRIIIMT DADVDGAHIR TLLLTFFYRQ MPDLVERGHI YIAQPPLYKV KNGKEELYIK
DGPALNQYLL RIALMNASVS TGGANPRTLD GEELAKLANM HLAAETVIDR LSNFMDAEAL
RAIADGVQIT LDSIEAAQAC APILEAKLRE LTTTGVPAEV TAEIDPVSEK PVLRISRHHH
GNIKSSILTQ EFVRSHDYAA LADEAQNFNG LLGEGAKVTR GEGEKAKSDK AGDFRQAMQW
LLHEAERTTA RQRYKGLGEM NPEQLWETTM DPTVRSLLQV QIGDAIEADR VFTMLMGDEV
EPRREFIETN ALRAGNIDV
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