Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_R0087 |
Symbol | |
ID | 5743688 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4175341 |
End bp | 4178240 |
Gene Length | 2900 bp |
Protein Length | |
Translation table | |
GC content | 50% |
IMG OID | 641294517 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GAGCGTATGG TGGATGCCTT GGCACTAAGA GCCGATGAAA GACGTGATAA GCTGCGATAA GCTACGGTGA GGAGCAAATA TCCTTTGACC CGTAGATTTC TGAATGGGGA AACCTAATGG AGCAAACCTC CATTGACGTA TGGTGAATAC ATAGCCATAC GCCGGGAACC CGGGGAACTG AAACATCTAA GTACCCGGAG GAAGAGAAAG AAAAATCGAT TTCCTGAGTA GCGGCGAGCG AAAGGGAAGG AGCCTAAACC GTGGATTTAT CCACGGGGTT ATGGACCGCA ATAAGTGACT TGAAAGGTAG AAGAATGGTT TTGGGAAAGC CAGCCAGAGA GAGTGAAAGC CTCGTATTCG AAACCGGAAG AGAGCGAGCG GTATCCAAAG TACAACGAGA CACGAGAAAC CTTGTTGGAA TTCGGGGGGA CCACCCCCCA AGGCTAAATA CTACTTAGTG ACCGATAGTG CATAGTACTG TGAAGGAAAG GTGAAAAGAA CCCCGGGAGG GGAGTGAAAG AGAACCTGAA ACCATATGTT TACAAGCTGT GGAACCACTT TATATGTGGA ACCGCGTACT TTTTGTAGAA CGGTCCGGCG AGTTACATTT ACTGGCAAGG TTAAGGACAG AAAGTCTGGA GCCGAAGGGA AACCAAGTCT GAATAGGGCG TAAATCCATC TTTGATGGAT CAGTCAGTAC GTGTATACCC GAAACCGGGT GATCTATCCA TGGTCAGGTT GAAGCTGCCG TAAAAGGTGG TGGAGGACCG AACACACATC CGTTGAAAAG GGTGGTGATG AACTGTGGAT AGGGGAGAAA TTCCAATCGA ACCCGGAGAT AGCTGGTTCT CCTCGAAATA GCTTTAGGGC TAGCCTCGAT TTAGTCTAAC GGAGGTAGAG CACTGAATAC CCTAGGGGGC GTCAAAGCTT ACCGAAGGTT ATCAAACTCC GAATGCCGTA TAGATGATGA TCGGGAGTCA GACTACACGA GATAAGTTGG GTAGTCAAAA GGGAAAGAGC CCAGACCACC AGCTAAGGTC CCAAAGTGTG TGTTAAGTGG AAAAGGATGT GGGATTTCAG AGACAACTAG GATGTTGGCT TAGAAGCAGC CATACATTCA AAGAGTGCGT AATAGCTCAC TAGTCGAGAG ATCCTGCGCC GAAAATGTCC GGGGCTAAAA CACACCACCG AAGCTGTGGA ATCATACAAT GTATGATTGG TAGAGGAGCA TTCTTAACTG CGAAGAAGCT GTACCGTAAG GAGCAGTGGA GTGTTAAGAA GAGAGAATGC CGGAATGAGT AGCGAGATAG AAGTGAGAAT CTTCTAGGCT GAATATCCAA GGTTTCCAGA GTAAAGCTGA TCTGCTCTGG GTAAGTCGGG GCCTAAGGCG AGGACGAGAG TCGTAGTCGA TGGACAACAG GTTGATATTC CTGTACCATA TAGTAACAGA ACTGTGGGGA CACAGAAAGG TAGGAAAAGC CGGGAATGGA AAAACCGGCG CAAGCACAAA GTCAAGCGAA ATAGGCAAAT CCGTTTCGTG ATGGTGAAGT GTGATGCGGA GTGAACTTTA AGTAACGAAG TTTCTGAACC TATGCTGTCG AGAAAAGCCG CTATTGTTTG CTATATGCCC GTACCGTAAA CCGACACAGG TGGATGAGGA GAGAATCCTA AGGCCGACGG GAGAAGCATT GTTAAGGAAC TCGGCAAAAT GACCCCGTAA CTTCGGGAGA AGGGGTGCCT GGGCAACCAG GCCGCAGAGA ATTGGCCCAA GCAACTGTTT AGCAAAAACA CAGGTCTATG CAAAACCGAA AGGTGAGGTA TATGGGCTGA CGCCTGCCCG GTGCTGGAAG GTTAAGGGGA GAGGTTAGAC GCAAGTCGAA GCTTTGAACT TAAGCCCCAG TAAACGGCGG CCGTAACTAT AACGGTCCTA AGGTAGCGAA ATTCCTTGTC GGGTAAGTTC CGACCCGCAC GAAAGGCGTA ATGATTTGGG CACTGTCTCG ACAATGCACC CGGTGAAATT GAAATACCAG TGAAGATGCT GGTTACCTGC GCCAGGACGG AAAGACCCCA TGGAGCTTTA CTTCAGCTTG ATACTGGGAT TCGGTGCTGC ATGTACAGGA TAGGTGGGAG ACTAAGAAGT AGGAACGCCA GTTCTTACAG AGTCGCTGTT GGGATACCAC CCTTGTAGTA CTGGATTTCT AACCTGTAGC CGTGACCCGG CTAGGGGACA ATGTCAGGCG GGGAGTTTGA CTGGGGCGGT CGCCTCCGAA AGGGTATCGG AGGCGCTCAA AGGTTCTCTC AGAATGGTTG GAAACCATTC GTAGAGTGCA AAGGCATAAG AGAGCTTGAC TGTGACACCG ACGGGTGGAG CAGGTACGAA AGTAGGACTT AGTGATCCGG TGGTATAAAG TGGGATTGCC ATCGCTCAAC GGATAAAAGC TACCCTGGGG ATAACAGGCT TATCACTCCC AAGAGTTCAC ATCGACGGAG TGGTTTGGCA CCTCGATGTC GGCTCATCGC ATCCTGGGGC TGTAGTAGGT CCCAAGGGTT GGGCTGTTCG CCCATTAAAG CGGTACGCGA GCTGGGTTCA GAACGTCGTG AGACAGTTCG GTCCCTATCC GGCGTAGGCG TAGGATATTT GAGAGGAGCT GTCCTTAGTA CGAGAGGACC GGGATGGACT GACCTCTGGT GTATCGGTTG TTCTACCAAG AGCATGGCCG AGTAGCCAAG TCGGGACGGG ATAAACGCTG AAGGCATCTA AGCGTGAAGC CCCCCTCAAG ATAAGATATC CCATAGCACA AGCTAGTAAG ACCCCTTAAA GACGATAAGG TTGATAGGAC AAAGGTGGAA GTGTGGTAAC ACATGTAGCT GATTGTTACT AATAGGTCGA GGGCTTAACC
|
Protein sequence | |
| |