Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3922 |
Symbol | |
ID | 5744698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4818485 |
End bp | 4819669 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641295038 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001561008 |
Protein GI | 160882040 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAAGAG CATACAAAGT GGAATTAAAA CCAACGAACC AGCAGATACA GAAGATTAAT CAATGTTTAG GCGTTTGCAG ATGGCTTTAT AACGCTTATC TTGCTAAGAA CCAATCACTT TATCAAGACT TTAAAGAGGG TAAGCTTAAT AAGAAAAAAG CCTTTATGTC AGCCAATGAC TTTGATAAGT ACATTAATAA TGATATTAAA GTTTTAGATG ATTGCAAGTG GATTAATGAT TGTGGTAGTA AAGCTAGAAA AAAAGCTATT TGTAATGCAG AATTTGCGTA TAAGAAGTTT TTTAAAGGTG AAGCACAATT TCCACGTTTT AAGAAGAAAG GTAAGTCTAA AGTAGGTTTA TATTTTCCAA AGAATAATAA AACCGATTTC AAGATTGAAC GTCATAAAAT TAATATACCT ACACTTAAAT GGGTTAGGCT TAAGGAATTT GGATATATCA AGGCCAATGC AAACGTCATT AGTGGTACGG TCACAGAACA AGCAGGAAAA TATTATATTT CAATTGTTTG TGAAGTAGAA GAAGTTAAGA ACTCCTTACC TAAAACAGAG CCATTAGGAC TAGATTTAGG AATAAAAGAT TTTGCTATTT TTAGTAATGA AATAGTTAAG AAGAACATCA ATAAGACTTC AAGAGTAAAG AAATTAGAAA AGAAGTTAAA ACGTGAACAA GTAAGGCTTT CAAGGAAATA TGAATGTCTT AAAAAACAAA ATAAAATAAG AAAAGGGGAG ACCACTAGAC AGAATATTCG TAAGCAAATA GTCAAAGTAC AAAGACTTCA ACAAAGATTA GCGAACATTC GTACTGATTA CATTAATAAA TGTGTGTCTG AAATAGTAGG ACAAAAACCA AGTTCAATAA CTATTGAAGA TTTGAATGTA AAAGGCATGA TGAAAAATCG CCACTTATCA AAAGCAGTTG CTGGGCAAAA GTTTTATGAG TTCAGAATAA AACTTACCAA CAAATGTAAA CAAAACGATA TTGAACTTAG AATAGTAGAT AGATGGTATC CATCTTCTAA GCTTTGCTCA TGTTGTGGAA ATGTCAAAAA AGACTTAAAA CTTTCTGACA GAATTTATGT TTGTAAAGAG TGTGGTCTAG TAATTGATAG GGATTATCAA GCTAGTATTA ATCTTAGAGA AGCAAAAACT TACATGATAG CATAA
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Protein sequence | MQRAYKVELK PTNQQIQKIN QCLGVCRWLY NAYLAKNQSL YQDFKEGKLN KKKAFMSAND FDKYINNDIK VLDDCKWIND CGSKARKKAI CNAEFAYKKF FKGEAQFPRF KKKGKSKVGL YFPKNNKTDF KIERHKINIP TLKWVRLKEF GYIKANANVI SGTVTEQAGK YYISIVCEVE EVKNSLPKTE PLGLDLGIKD FAIFSNEIVK KNINKTSRVK KLEKKLKREQ VRLSRKYECL KKQNKIRKGE TTRQNIRKQI VKVQRLQQRL ANIRTDYINK CVSEIVGQKP SSITIEDLNV KGMMKNRHLS KAVAGQKFYE FRIKLTNKCK QNDIELRIVD RWYPSSKLCS CCGNVKKDLK LSDRIYVCKE CGLVIDRDYQ ASINLREAKT YMIA
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