Gene Cphy_3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3913 
Symbol 
ID5742311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4809407 
End bp4810399 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content35% 
IMG OID641295027 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_001560999 
Protein GI160882031 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCT TTAAAGATGT CATTGGGCAT GAAGAAATTG TGAATCATCT TCAAAACGCA 
ATCAAAACCA ATAAGGTTTC TCACGCGTAT ATCTTTCAAG GGGAAGATGG AATCGGAAAA
AACTTTGTTG CAAATATTTT TGCTGCTGCT CTTTTGTGTA GTGAACATGG AACCAATCCA
TGTACCAAAT GTAAATCCTG CTTACAAGCA GTTTCAGGAA ATCAGCCAGA TATTCGTAGA
ATCACTCATG AGAAAGCGAG TATTGGTGTA GATGATATAA GACTTCAGTT AAATAATGAC
ATTGCAATTA AGCCTTATGT TGGCCCTTAT AAAATCTATA TCATAGATGA AGCGGAGAAG
ATGACAGAGC AAGCTCAAAA TGCTCTCTTG AAAACAATTG AAGAACCGCC CGGGTATGCA
ATAATTCTAT TATTAACAAA CAATAGCAAT TCTTTTTTAC CAACGATATT ATCCCGCTGC
GTTTTACTTA ATTTTAAAGC AGTGGACAAG AATAAAATCA AACAATATCT CATAGACGAA
GAACATATCG TGGAGTATCA AGCACAAATC AGTGCATCCT TTTCCGGAGG TAATTTGGGG
AAAGCGATTA AGTATGCGAC CTCAGAACGA TTTGTAAAGA TGAAGGAGGA TATCATTCAT
CTCATGAATA ATATGGAGGG AATGGACCTT AGTGATATTG CAGAAGCGGT CAAATATTTC
TCAGAAAATA AAAGTGATAT TTTAGACTGC TTGGATTTAA TGCTTCTATG GTATCGAGAT
ATTTTAATGT TTAAGGCGAC GCAGGATGGC AATCTTTTAG TATATAAGGA AGAATTGTCT
ACCATTAAAA AGCAAGCAAA ATTAACCAGC TTTGAAGGGT TAGAGCAAAT AATACAGGCG
TTTAGTACGG TCAAAGAACG ATTGAATGCA AATGTAAATT TTGAAGTAGC AATGGAACTT
TTATTACTTT CTATGAAGGA AAGTTATCAA TAG
 
Protein sequence
MNTFKDVIGH EEIVNHLQNA IKTNKVSHAY IFQGEDGIGK NFVANIFAAA LLCSEHGTNP 
CTKCKSCLQA VSGNQPDIRR ITHEKASIGV DDIRLQLNND IAIKPYVGPY KIYIIDEAEK
MTEQAQNALL KTIEEPPGYA IILLLTNNSN SFLPTILSRC VLLNFKAVDK NKIKQYLIDE
EHIVEYQAQI SASFSGGNLG KAIKYATSER FVKMKEDIIH LMNNMEGMDL SDIAEAVKYF
SENKSDILDC LDLMLLWYRD ILMFKATQDG NLLVYKEELS TIKKQAKLTS FEGLEQIIQA
FSTVKERLNA NVNFEVAMEL LLLSMKESYQ