Gene Cphy_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3907 
Symbol 
ID5742305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4804493 
End bp4805017 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content36% 
IMG OID641295021 
Productnucleoside recognition domain-containing protein 
Protein accessionYP_001560993 
Protein GI160882025 
COG category[S] Function unknown 
COG ID[COG0700] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTG TAGTCTACCT ATCGGATTAT ATTATACCAC TACTTTTCTT TTATATCATC 
GGTATGGGAA TTCTCATGAA AAGACCAGTT TACGATGACT TTATAAAAGG AGCGAAAGAA
GGATTTCAAG TAGTGCTTGG AATTATGCCA ACACTTATTG GGCTAATGGT TGCTATCGGA
ATCCTACGGG CTTCTGGAGT GTTGTTATTA ATATCAAATG CTCTGGATGG AGTAACTTCC
GTATTTCATT TCCCATCAGA AATTGTTCCT CTTGTAATTA TTAAGATGTT CTCTTCCTCT
GCTGCAACTA GTTTATTGCT TGATTTATTC AAAGAGTTCG GTCCAGATTC TTATATTGGT
AGGTTAAGTA GTATTATTAT GAGTTGTACA GAAACAATCT TCTACACAAT GGCAGTGTAT
TATATGACTG CAGGAGTCAA GAAAACAAGA TACACCTTAG CAGGGGCCTT AGTTGCTACT
TTAGCAGGAG TTATCATTAG TACTTTATTT ATGGGGTTAA TGTAA
 
Protein sequence
MKFVVYLSDY IIPLLFFYII GMGILMKRPV YDDFIKGAKE GFQVVLGIMP TLIGLMVAIG 
ILRASGVLLL ISNALDGVTS VFHFPSEIVP LVIIKMFSSS AATSLLLDLF KEFGPDSYIG
RLSSIIMSCT ETIFYTMAVY YMTAGVKKTR YTLAGALVAT LAGVIISTLF MGLM