Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3884 |
Symbol | |
ID | 5742281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4772764 |
End bp | 4773486 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641294997 |
Product | ABC transporter related |
Protein accession | YP_001560970 |
Protein GI | 160882002 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAGG TAAATCACGT ACATAAGGCT TATCAAAATC ATACTGCTGT AGAGGACATT AGTTTTCAGA TGAAGCAGGG CGAAATTACA GGTTTAATTG GTCCAAACGG TGCGGGAAAA TCAACGACAG TATCGATGAT CGCAACCTTA CTTCGACCGG ACAAAGGGCA GATTCTTTTC AATGGAGAGG ATATTGCAAA AAACCCTAAA ATAATCCGAA GTTCCTTGGG ATACGTACCT CAAGACATTG CACTCTACGA GTCACTTACT GGAATGGATA ATTTTGAATT TTGGGGAAAT GCCTATCATT TATCAAAAGC ACTGAAGAAA GAACGAATAA AACAATTGAG TGATATGATA GGTTTTACCG AGAGTGAGTT AAATCGAAAA GTGAAAGAGT ACTCCGGTGG TATGAAAAGA AGATTAAATA TTGCGGTAGC ACTGCTACAT GAACCCCAAT TAGTAATCTT AGATGAGCCA ACCGTTGGGA TTGACTTACA ATCGAGAAAA CAGATTTTAT CTGCTATTGA ACAGTTAAAG AAGGCTGGAA CTGCTATTTT ATATGTAGGT CATTATTTAG AAGAAGTAGA ACGCTTGTGT GACCGAATTC TTATTTTCAA TCAGGGAAGA TGTGTATGGA ATGATACCGT ATCAAATTCT CTAATCCAAA GTGGTAATAA AATATCCTTA GAGCAGCTCT ATGAGGAATT AAGTATTAAT TAA
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Protein sequence | MLEVNHVHKA YQNHTAVEDI SFQMKQGEIT GLIGPNGAGK STTVSMIATL LRPDKGQILF NGEDIAKNPK IIRSSLGYVP QDIALYESLT GMDNFEFWGN AYHLSKALKK ERIKQLSDMI GFTESELNRK VKEYSGGMKR RLNIAVALLH EPQLVILDEP TVGIDLQSRK QILSAIEQLK KAGTAILYVG HYLEEVERLC DRILIFNQGR CVWNDTVSNS LIQSGNKISL EQLYEELSIN
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