Gene Cphy_3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3865 
Symbol 
ID5744818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4746361 
End bp4747179 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content39% 
IMG OID641294978 
Producthypothetical protein 
Protein accessionYP_001560951 
Protein GI160881983 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA TACGTCATCA ATTCGAAGTA ATGAAAGCAG TGGCACTGGT TACCTATAAG 
GAATGGAGTG CCTACCGCAC CCATTCCATG GTTTCAATTT TTGTAGGACC AGTTTATTTT
ATTGTCCAAT ATTTTATCTG GACGTCGGCT TATGGTGGGA AAGCGGAGAT TAATGGCATG
CAACTATCTC AGATAATAAC CTATTTTGGA GCTTCCACCC TGATAGGTTA TTTGACGATG
GATTTTGCGG ATTGGAATTT ACAGATGCTA ATCCAGACCG GTAAGTTTTT GACTTTTTCC
TTGAGACCGA TACACCATCG CTTCTTTGCA TTTTCGCAGA AGGTTGGACA TCGGTTTCTT
GGGTTGCTAT TTGAATTTAT TCCATGTTAT TTAATTTTTT CCCTACTGTT CGGTGTTGAA
ATGATACCGA AAAGGATAGG ATGGACATTA CTCTCCGTAG CTTTTGCTTT CTTAATGAAC
TTCTATGTTC ATTATATACT GGGAATGACT GCATTTTGGT TTATACAATC TTCCGGGATA
CGAAGGGTGT TTGATCTTTT ATCTGGAGTG TTTTCCGGAG CCTTCATACC ATTGGTATTT
TTTCCTGAGG CTGTGCAAAG AGTACTATTC TTCTTACCAT TTCCGTATAT GTCCTATGTT
CCGGCAATGG TATTTACCGG AGAGTTTCAT TTGGCAGGCA TTAATATGCC GATACCAACA
ATCGTAGGTC TTCAGGGAAT CGCTGTAGGT GTCGTTATAA TTTTAAGTGA GCTAATTTAT
AAAGCATCCA TGCATCATTT TAATGGTGTC GGGGTTTAA
 
Protein sequence
MKYIRHQFEV MKAVALVTYK EWSAYRTHSM VSIFVGPVYF IVQYFIWTSA YGGKAEINGM 
QLSQIITYFG ASTLIGYLTM DFADWNLQML IQTGKFLTFS LRPIHHRFFA FSQKVGHRFL
GLLFEFIPCY LIFSLLFGVE MIPKRIGWTL LSVAFAFLMN FYVHYILGMT AFWFIQSSGI
RRVFDLLSGV FSGAFIPLVF FPEAVQRVLF FLPFPYMSYV PAMVFTGEFH LAGINMPIPT
IVGLQGIAVG VVIILSELIY KASMHHFNGV GV