| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3817 |
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| Symbol | |
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| ID | 5744769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 4670157 |
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| End bp | 4670885 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641294929 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001560903 |
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| Protein GI | 160881935 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000009679 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAT ACCGCTATAC CACACTTCTT TTTGATGCCG ATGATACCTT ATTAGACTTT
AAAGCATCCG AGCAAGATGC ATTATCTTAT ATTTTTGAAC AAGTTAACGT ACCTCTTACC
GAGGAGATTC TTTCTTTCTA CCATGAAATT AATCATGGTT TATGGGAAGC TTTCGAAAGA
GGTGAAATTT CTCGAAATGA TATCCTGCAA ACGCGCTTTG TAACAGTATT TGATGCATTA
CAAAAAAGAG GAATTGCCCC TAGGAATCTA ACATTTGGAA GAAAGCCAAT CGATTCTACG
GATCTTGAAC CACTATATCA AGCAAAACTT GCAACGGGTC ACAACTTAAT ACCTGGGGCT
AAAGAGCTAA TTGAAACTCT TCGTAAAACT CATCGTGTTT ATATTGTCTC GAATGGCGTG
GCCACTACCC AGCAAGACCG CTTAAATGCC TCCGGCCTAT TCCCTCTTTT TGAAGATATA
TTTATCTCAG AAATGACCGG ATATCAAAAA CCACAAGTGG AATTTTTCCA TTATTGTATT
GCTCGTATTC CTGAATTTTC TCCTGAAACT ACTCTAATTA TTGGAGATAG CCTTACTTCT
GATATCAAAG GTGGCAATAA CATCGGTATT GATACTTGTT GGTTTAATCC AAGGCACGTA
GAAAAAAGAA TAGATGTAAC TATAACCTAT GAAATCCACA AGTTAGAGGA ACTGTATCAA
ATTGTTTAG
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| Protein sequence | MKSYRYTTLL FDADDTLLDF KASEQDALSY IFEQVNVPLT EEILSFYHEI NHGLWEAFER
GEISRNDILQ TRFVTVFDAL QKRGIAPRNL TFGRKPIDST DLEPLYQAKL ATGHNLIPGA
KELIETLRKT HRVYIVSNGV ATTQQDRLNA SGLFPLFEDI FISEMTGYQK PQVEFFHYCI
ARIPEFSPET TLIIGDSLTS DIKGGNNIGI DTCWFNPRHV EKRIDVTITY EIHKLEELYQ
IV
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