Gene Cphy_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3798 
Symbol 
ID5744750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4652419 
End bp4653702 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content40% 
IMG OID641294910 
ProductFe-S cluster domain-containing protein 
Protein accessionYP_001560884 
Protein GI160881916 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.818918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGG GGAAGTTTCA TACCGCGGTA CGATTAGATG AAAACCTTTG TAAGGGCTGT 
ATCAATTGCA TTAAGCGTTG CCCTACCGAG GCAATAAGAG TTCGTAATCA AAAGGCGGTA
ATCACAAAGG AATTTTGTAT CGACTGTGGT GAGTGTATTA GAATATGTCC TCATCATGCC
AAGAATGCGA CGTATGATAG TATGGATATG ATTAAGCAAT TCGAATATAC CGTTGCCTTA
CCAGCACCTT CTTTGTATGC ACAGATGAAT AATTTAGATG ATATTAATAT TGTTTTAAAT
GCCTTAAAGT TAATGGGATT CTCTGATGTT TTTGAAGTAA GCGGTGCTGC TGAAATTGTA
TCTGCAGCAA CTAGAATGTA CATAGAAGAA CATAAGGAGA AGTGGCCTGT TATTAGTACG
GCATGCCCTG TGGTAACTAG ATTGATTCGT GTCCGTTTTC CAAGCTTATT GGAGCATCTG
CTTCCGTTAA AGGCGCCAGT TGATATTGCT GCGGAATTAG CTAGAAAAAT AGCCATGGAA
AAGACGGGAC TTCCAAGTGA GAAAATAGGT ATCTTTTTCA TTTCACCATG CCCAGCGAAG
GTTACAGCGG CAAAAAATCC GTTGGGATAT GAAAAAAGTG AGGTGGATGG GGTACTTGCA
ATTAAGGATG TCTATCCTCA GTTAATTAGC TGTATGAAAA CTGTAGCAGA AAGAGAAGAG
TTAGAAGACC TTGCAATCGC AGGTAAAATA GGAATCAGCT GGGGTTCTAG TGGCGGTGAG
GCAAGTGGAC TTCTAACAGA TAGTTACCTT GCAGCAGATG GAATTGAAAA TATCATTCGA
GTACTTGAGG ATATGGAGGA TCAGAAGTTT ACGAATCTTG AGTTTATTGA ACTGAATGCT
TGTAATGGAG GCTGCGTTGG AGGGGTACTT ACTGTTGAAA ATCCATATGT TGCAAAAGTA
AAACTAAAGA GACTTCGTAA ATATATGCCT GTTGCAAGAA CACATATTCC ACTTGAAAGT
ATTGATATTG GCTGGACACA GGAAGTTGAA TATGAACCTG TATTCAATCT TGGTGTCAGT
TTACTTGAAA GTATCGGTAA GGTAGCAAAA GTAGAAGAAC TTTGTAAGAA GTTTCCGGGG
CTTGACTGTG GTTCTTGCGG AGCTCCGACT TGTAAGGCTC TTGCAGAGGA TATTGTGAGA
GGGGTTGCAG AGGAAAACTA TTGCATCCAT ATCTTTAGAG AGTATGTAAG CAAGCTATCT
GGTAAATTTA CAAAGGATAA TTAG
 
Protein sequence
MTMGKFHTAV RLDENLCKGC INCIKRCPTE AIRVRNQKAV ITKEFCIDCG ECIRICPHHA 
KNATYDSMDM IKQFEYTVAL PAPSLYAQMN NLDDINIVLN ALKLMGFSDV FEVSGAAEIV
SAATRMYIEE HKEKWPVIST ACPVVTRLIR VRFPSLLEHL LPLKAPVDIA AELARKIAME
KTGLPSEKIG IFFISPCPAK VTAAKNPLGY EKSEVDGVLA IKDVYPQLIS CMKTVAEREE
LEDLAIAGKI GISWGSSGGE ASGLLTDSYL AADGIENIIR VLEDMEDQKF TNLEFIELNA
CNGGCVGGVL TVENPYVAKV KLKRLRKYMP VARTHIPLES IDIGWTQEVE YEPVFNLGVS
LLESIGKVAK VEELCKKFPG LDCGSCGAPT CKALAEDIVR GVAEENYCIH IFREYVSKLS
GKFTKDN