Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3780 |
Symbol | |
ID | 5744732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4632622 |
End bp | 4633419 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641294892 |
Product | ABC transporter related |
Protein accession | YP_001560866 |
Protein GI | 160881898 |
COG category | [R] General function prediction only |
COG ID | [COG4586] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000137492 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGAAG TGGAACACAT TTCTAAAACC TTTCGAGTGA GCAGAAGAAA TTCTGGATTT AAAGAAGCAA CAAAAGCGTT GTTTCATCGT GAATACGAAG AATTAAAAGC ACTCGATGAC ATCTCTTTTA CGATAGCTGA CGGTGAAATG GTTGGCTATA TCGGTCCTAA TGGTGCAGGG AAAAGCAGCA CCATCAAAAT TTTAAGTGGA ATCTTATATC CGGATTCCGG TACCTGTTTA GTAAATGGAA GAATTCCTTG GAAGGAACGA AAGGCTCATG TGAAAGACAT CGGAGTCGTT TTTGGGCAGC GCTCGCAGCT ATGGTGGGAT GTCCCTGTCA TTGATTCGTT TGAACTTTTA AAGGATATTT ACGACATTCC ATTGACTACT TACCGGGATA ATTTAGAGGA ACTGATTACA CTTCTTAATT TATCTCAAAT AATAAAAACT CCAACAAGAC AATTATCACT AGGGCAGCGG ATGCGCTGTG AAATAGCAGC ATCTCTTCTT CATGAGCCTA AAATCTTATT TTTGGATGAA CCAACAATAG GACTTGATGC TATATCAAAG CTGGCGGTGC GTGATTTTAT TAGGAAACGA AATGAAACAC ATAAAACGAC GGTTATCTTA ACGACTCATG ATATGCAAGA TATTGAAGCC TTGTCAAAAC GAATCATCTT AATTGGCAAA GGCAGACTCT TGATGGATGG AACCCTTGAT GAATTAAAAG CTGTGAAAGC GGAGGATTCA ATTGATGAAG TAATTGCTTC GATGTATCGG AAATATGATA TCGCATAA
|
Protein sequence | MIEVEHISKT FRVSRRNSGF KEATKALFHR EYEELKALDD ISFTIADGEM VGYIGPNGAG KSSTIKILSG ILYPDSGTCL VNGRIPWKER KAHVKDIGVV FGQRSQLWWD VPVIDSFELL KDIYDIPLTT YRDNLEELIT LLNLSQIIKT PTRQLSLGQR MRCEIAASLL HEPKILFLDE PTIGLDAISK LAVRDFIRKR NETHKTTVIL TTHDMQDIEA LSKRIILIGK GRLLMDGTLD ELKAVKAEDS IDEVIASMYR KYDIA
|
| |