Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3759 |
Symbol | |
ID | 5744711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 4611614 |
End bp | 4612393 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641294871 |
Product | PT repeat-containing protein |
Protein accession | YP_001560845 |
Protein GI | 160881877 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAT CATTATGTTT ACTACTATCA GCAACCTTAG CGTTTAGCAT GACCGCTTGT TCTGTTAAAA AGGAAGCAAG TGACGTGGAG CCTACCACTG CACCAACAGC AACAGAAGCT CCTACAACGG AGCCTACTAG TACACCGACA GAAGTACCAG ATAATACACC AACCGCTGAA CCTACCGCAG AGCCTACGGA AGAACCTACT GAAGTACCTA CGGAAACGCC AATAGCAACT ACACAGCCTA CAAAATCTCC AGAAGCTACG AAGGCTCCTA CAAAGACACC AGCTCCTACA AAAGCTCCAA GTAAACCAAC CAGTACTCCA AAGCCAACTA GTAAGCCAAA ACCAACTGCT ACTCCAAAGC CAACAAAGGC TCCAACTGCT ACCCCAGAAG CTCCTGCAGA AAAGAAGAGC TTAGAAGATA TGATGAGTAC TATTCTGGAC GGAGTTGATC TTCCAATGGT TTTTAATACA ACCGTTGATA AAGATAATTT TCCCTATTAT TTAGGTATCG AAGCAATTCC TGGGGCAGAG GCTCTTGCTT CTGATGGTGC TATGACAACT ACCGCACATT CCGTCGTACT TTTACGTGTT CCAAGCAAAA GTGATGTGAA AAGTGTTGCA AAAGATGTGG AAGCAAATGC AAATCCAAGA AAATGGATTT GTGTAGGTGC TGAAAAAGTA TCTGTTTCTT ATAAAGACGA TGTTATTTTA TTAGTTATGT CTAAAACAGA AACAGTGGAT GCGGTTGTTA AAAATTTTGA GAACCAATAA
|
Protein sequence | MKKSLCLLLS ATLAFSMTAC SVKKEASDVE PTTAPTATEA PTTEPTSTPT EVPDNTPTAE PTAEPTEEPT EVPTETPIAT TQPTKSPEAT KAPTKTPAPT KAPSKPTSTP KPTSKPKPTA TPKPTKAPTA TPEAPAEKKS LEDMMSTILD GVDLPMVFNT TVDKDNFPYY LGIEAIPGAE ALASDGAMTT TAHSVVLLRV PSKSDVKSVA KDVEANANPR KWICVGAEKV SVSYKDDVIL LVMSKTETVD AVVKNFENQ
|
| |