Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3731 |
Symbol | |
ID | 5742930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 4584824 |
End bp | 4585897 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641294843 |
Product | phosphotransferase system, EIIC |
Protein accession | YP_001560817 |
Protein GI | 160881849 |
COG category | [R] General function prediction only |
COG ID | [COG3641] Predicted membrane protein, putative toxin regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000282587 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTAACA TTAAAAAAAT TCTAAATCGT ATCTTTATTG AAGGATTAAG CGGAATGGCA CTTGGTCTAT TTTCCACCTT AATTGTCGGT ACCATCCTAC AACAGATTTC AAAATTCATC GGTGGTACAG TTGGAGATAC CATATTTTTA ATTAGTAAAA TAGCTACTAT TTTAACAGGA GCTGGTATTG GTTGTGGAGT AGCATATAAG TTTAAAGAGC CGCCATTAGT TTTATTATCC GCTGCTACCG CTGGAATGGT TGGTGCCTAT GCCTCTAATA TCTTAAAGGG TACCCTTCTA TTGTCTGATA CCGCGACACC AACGATAGCA TTTGCATCTC CGGGAGAGCC ATTAGGAGCG TTTATCGCTG CTTATATAGC GATTACTATC GGCCATCTGG TATCTGGTAA GACCAAAGTA GATATCCTTG TTACACCAAT TACCTCTATT GCTTCTGGTT CCATTGCAGG ATTATTGGTT GGGCCAGCTA TCACTAATTT TATAACAGCT TTAGGTGAGC TTATCAATTG GGGTACAGAA AGACAGCCTC TTCTAATGGG CATTATTGTT TCTGTTATCA TGGGAATTGT ACTAACCCTC CCAATCAGTT CTGCTGCCCT AGGAATTTCT TTAAAGTTAG GCGGAATTGC AGCGGGTGCT GCCTGTATCG GATGTTGCGC AAACATGGTC GGCTTTGCTG TTGCAAGTTA CCGTGAAAAT AAAATAGGTG GTTTATTCGC ACAAGGCGTA GGAACAAGTA TGCTTCAGAT GCCAAACATC GTTAAAAAAC CAATCATCTG GTTACCTGCA ATTATCTCTA GTGCTATTTT AGGTCCGATT TCTGCACTTA TCGGTATGAC CAACAATCCT ACAGGATCTG GTATGGGTAC TTCTGGATTA GTAGGTCAGT TTATGGCCTT TGATTCCATG GTTCCTACGT TTGGTACTGT TGGTTCTATT GGCTTAATTC TATTAATGCA CTTTGTCTTA CCTGCTGTTA TCTCTATTCT CGTATCAGAA TTTATGCGAA AGAAAAATTG GATTAAATTC GGTGATATGA AATTAGATGC CTAA
|
Protein sequence | MSNIKKILNR IFIEGLSGMA LGLFSTLIVG TILQQISKFI GGTVGDTIFL ISKIATILTG AGIGCGVAYK FKEPPLVLLS AATAGMVGAY ASNILKGTLL LSDTATPTIA FASPGEPLGA FIAAYIAITI GHLVSGKTKV DILVTPITSI ASGSIAGLLV GPAITNFITA LGELINWGTE RQPLLMGIIV SVIMGIVLTL PISSAALGIS LKLGGIAAGA ACIGCCANMV GFAVASYREN KIGGLFAQGV GTSMLQMPNI VKKPIIWLPA IISSAILGPI SALIGMTNNP TGSGMGTSGL VGQFMAFDSM VPTFGTVGSI GLILLMHFVL PAVISILVSE FMRKKNWIKF GDMKLDA
|
| |