Gene Cphy_3699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3699 
Symbol 
ID5742723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4547679 
End bp4549472 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content36% 
IMG OID641294809 
Productoligoendopeptidase F 
Protein accessionYP_001560785 
Protein GI160881817 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1164] Oligoendopeptidase F 
TIGRFAM ID[TIGR00181] oligoendopeptidase F 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG AATTAAAAAA GCGTAGTGAA GTCGCTAAAG AAAATACATG GGCAATTGAA 
GACATATTTG CCAGTGATGA ACTATGGTAC AAAAATCTAG AGGAATTAAA AGGGTATAAG
GAAAAAATAT TAGCTTTTAA AGGTAAACTT GGTAGCAGTT CCAAGACATT ATTAGCATTC
TATCAACAAG TGGAAGAATT ATTAAGATTA TTAGATGACT TATTAAATTA TTCTTCGAGA
AAACGTGACC AGGACACGAA AAACTCTACT TATCAGGCAA TGGATGGTGC GATGATGACT
GCCTATGTTG AAGTTTCGGA AGCACTTTCC TTTGAAACTC CAGAAATTAT TACAATACCA
GACGAAAAGA TGGAAGAATT CTATCAAGAA GAAAAAGGCT TAGAACTCTA TCGTCGTCAT
ATTGAATCGC AAAGAAGAAT GAAGGCACAC GTACTCTCGG ATGCGGAAGA AAGATTACTT
GCTGCTGCGG GAGAGATGTC ATCTGCGCCT GGAAACATTA ATTCTACATT TAATAACGCT
GATCTAGTAT TTCCTGAAAT CACTGATGAG GATGGAGATA AGGTTCGAAT TACTCATGGT
AACTTCATTC CATTTATGAC GAGTAAAGAT AGAAGAGTTA GAAAAGAAGC ATTTGATGCA
CTTTATAGTG TATACGAGCA ATATAAGAAT ACTTCGGCGT CTATTCTAAA TGCACAGGTA
AAACAGTTAC AATTCTTTGC AAGGGCTAAA AAATACAATA CAGCTATTGA AGCAGCCCTT
GATGTAACAG AAGTGCCGGT ATCGGTATAT CATAGCTTGA TTGAAGCGGT AAATAAAAAT
CTACCTCATC TTCATCGTTA TATGGATATT AGAAAGAAAG TTCTTGGTGT AGAAGAGCTT
CATATGTATG ACCTCTATAC CCCAATTATT GAAGAAGCAG ATAGTAAGGT AAGTTTCGAG
GAAGCAAAGA AGACAATCCT AGAGGCTTTA AGACCGATGG GAGAGGATTA TATCCGCGTC
TTAGAAGAAG GTTTTAATAA TCGCTGGATT GATGTTTATG AAAATGAAGG AAAGCGTAGT
GGAGCATATT CCGCTGGAGC AAGAGTTCAT CCATATGTGT TAATGAATTA TGCGGATACG
ATTGATAGTA TGTTTACATT AGCTCATGAA ATGGGTCATG CTCTACATTC TTATTTATCC
AACCACACTC AACCAACAAT TTACAGCGAT TATGTTATCT TTGTTGCTGA GGTTGCCTCT
ACCTGCAATG AGAATTTATT AATGCAGTAT CTACTAAAGA ATACAACCGA TAAGAAAAAG
AGAGCGTATT TGATCAATCA TCAACTTGAA AATTATCGTA CTACATTATT CCGTCAGACG
ATGTTTGCAG AATTCGAATT AATGATTAAT ACAAAGGCAG AGCAGGGGGA AACCTTAACT
GCAGATATGC TATGTGAAAT GTACCGTGGA TTAAATGAAA AGTACTACGG AAAAGATGTT
GTGATTGATG ATAAGATTGC AGTTGAATGG GCAAGAATTC CTCATTTCTA CTACAATTAT
TATGTATTCC AATATGCTAC AGGATACTCT GCTGCGGTAG CTTTATCAAA CCGTATCTTA
ACGGAAGGGG AATCTGCAGT GAAGGATTAT TTAAAATTCT TAAGTGGTGG TAGATCAGCA
GATCCAATCT CCTTATTAAA GATTGCTGGA ATTGACATGA GTACATCAAA GCCAGTAGAA
GAAGCTCTTA AGAAGCTTGG AAATTTATTA GATGAGTTTG AAAGTTTAAT ATAA
 
Protein sequence
MAKELKKRSE VAKENTWAIE DIFASDELWY KNLEELKGYK EKILAFKGKL GSSSKTLLAF 
YQQVEELLRL LDDLLNYSSR KRDQDTKNST YQAMDGAMMT AYVEVSEALS FETPEIITIP
DEKMEEFYQE EKGLELYRRH IESQRRMKAH VLSDAEERLL AAAGEMSSAP GNINSTFNNA
DLVFPEITDE DGDKVRITHG NFIPFMTSKD RRVRKEAFDA LYSVYEQYKN TSASILNAQV
KQLQFFARAK KYNTAIEAAL DVTEVPVSVY HSLIEAVNKN LPHLHRYMDI RKKVLGVEEL
HMYDLYTPII EEADSKVSFE EAKKTILEAL RPMGEDYIRV LEEGFNNRWI DVYENEGKRS
GAYSAGARVH PYVLMNYADT IDSMFTLAHE MGHALHSYLS NHTQPTIYSD YVIFVAEVAS
TCNENLLMQY LLKNTTDKKK RAYLINHQLE NYRTTLFRQT MFAEFELMIN TKAEQGETLT
ADMLCEMYRG LNEKYYGKDV VIDDKIAVEW ARIPHFYYNY YVFQYATGYS AAVALSNRIL
TEGESAVKDY LKFLSGGRSA DPISLLKIAG IDMSTSKPVE EALKKLGNLL DEFESLI