| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3692 |
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| Symbol | |
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| ID | 5742716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4540603 |
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| End bp | 4541295 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641294802 |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_001560778 |
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| Protein GI | 160881810 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000151678 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGAG GAAAGAAATA TACTGATTCA GCAAAGCTTA TCGACAGAAC TGCTCAATAT
GATGTTGCTG ACGCAATCAG TTTAGTAAGA AAATCTGCAG TAGCTAAATT CGATGAGACA
ATCGAAGCGC ACATCAGACT TGGTGTAGAC GGACGTCACG CTGACCAACA GGTTCGTGGA
GCGGTAGTAT TACCACACGG AACTGGTAAA ACAGTTAGAG TTCTTGTATT TGCTAAGGGG
GATAAGGTAA ATGAAGCTTT AGCAGCAGGC GCTGACTTCG TGGGTGGCGA TGAGTTAATT
CCAAAGATCC AGAACGATGG ATGGTTTGAA TTTGACGTTG TAGTTGCAAC TCCAGACATG
ATGGGTGTAG TTGGTCGTCT TGGTCGTGTA CTTGGACCTA AGGGCTTAAT GCCAAACCCT
AAGGCAGGAA CAGTTACTAT GGATGTTACT AAGGCTGTTA ATGATATCAA GGCCGGTAAA
ATCGAATATA GATTGGATAA GACAAACATT ATCCACGTGC CAGTTGGTAA AGCTTCCTTT
ACCGAAGAAC AACTCGCAGA CAACTTCCAA GCGCTTATGG GTGCAATCAT CAAGGCTAAA
CCTGCTGCAG CTAAGGGACA GTATTTAAGA AGCGTAACAG TCGCATCTAC AATGGGCCCT
GGAATCAAGC TTAACACAAG TAAATTAGCA TAA
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| Protein sequence | MKRGKKYTDS AKLIDRTAQY DVADAISLVR KSAVAKFDET IEAHIRLGVD GRHADQQVRG
AVVLPHGTGK TVRVLVFAKG DKVNEALAAG ADFVGGDELI PKIQNDGWFE FDVVVATPDM
MGVVGRLGRV LGPKGLMPNP KAGTVTMDVT KAVNDIKAGK IEYRLDKTNI IHVPVGKASF
TEEQLADNFQ ALMGAIIKAK PAAAKGQYLR SVTVASTMGP GIKLNTSKLA
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