Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3678 |
Symbol | |
ID | 5742702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4518411 |
End bp | 4518959 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641294788 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001560764 |
Protein GI | 160881796 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000970157 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAA TAACAGTTAC AGAATGTGGT ATTGATGGGC TATTTGTAAT TGAACCAACA ATATTTAAAG ACAATCGTGG ATACTTTATA GAGACGTATC ATAAAGAGGC ATATGAAGCC GCAGGGATTA CCGCAGAGTT TATACAGGAC AACCAGTCAA TGTCAAAAAA GGGAGTACTA AGAGGGCTTC ATTTTCAAAT CAATTACCCG CAAGCGAAAC TCGTTCGTGT ATTAAGTGGT GAGGTTTTTG ATGTGGCAGT AGATCTTCGA AAAGGCTCCA AAACATTTGG TAAATGGTAT GGTGTAGTGC TTAGTGAAGA GAATCAAAAG CAATTTTTTG TACCAGAGGG ATTTGCACAT GGATATTTAG TCTTATCTGA TACTGCTGTG TTTGCTTATA AGTGTACTGA CTTCTATCAC CCGGGTGATG ATGGTGGACT ACTTTGGAAT GATCCTGAGG TTGGTATTGA GTGGCCAATT CCAGAAGATA TGGATTTAGT TATTGCACAA AGGGATCAAG AATGGGGAAC TTTAGCCGAT ATAAAATAG
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Protein sequence | MGKITVTECG IDGLFVIEPT IFKDNRGYFI ETYHKEAYEA AGITAEFIQD NQSMSKKGVL RGLHFQINYP QAKLVRVLSG EVFDVAVDLR KGSKTFGKWY GVVLSEENQK QFFVPEGFAH GYLVLSDTAV FAYKCTDFYH PGDDGGLLWN DPEVGIEWPI PEDMDLVIAQ RDQEWGTLAD IK
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