| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3673 |
|---|
| Symbol | |
|---|
| ID | 5742697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 4512786 |
|---|
| End bp | 4513982 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641294783 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001560759 |
|---|
| Protein GI | 160881791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00019433 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACAA TTTTTAGCGC CGGAATACGG CATGTTATCA TATTGTATAG AAAGCGAGAA
CTACTCATGG TAATTCAATA TAAATGCCCT AGCTGTGGCG CAGATTTAAC ATTTGATACT
ACGTCAAAAA AACTTCATTG TGCCAGCTGT GGAAGTTATT ATTCCATTGA TTCTATGCCT
CCCCCTGATA TCCCTCTTGG CGAATCAGAT GACGCCCCAA AGGTTAACCC CTTTGGCCCT
CAGGATATCT ACGAGGAAGC CTCCTTTGAT TATAAACAGA AATCTGAATG GCAGCATAAG
GATTTTAGTA GTAGTAAGGT ATCTGAGTAT CATTGTAAAA ACTGTGGTGC TGTTGTTATT
ACAGACAAAG ATACCATTGC AACTTCCTGT AGTTTTTGTG GGGCTGCCGT AGTTTTAAGC
GATCGAATAG AAGGCCAACT AGAACCTTCA AGAATCATAC CCTTTAAAAT TAACCGCGAT
CAAGCAACAA AGGCATTCCA AAAGTGGTGT AAAAAAGGGC TACTAACTCC TACAGAATTT
AAACATGCAG ACCGTGTAAA AAACATTACT GGTATCTACA TACCATTCTG GTTATACGAC
TTAAATGGAA TTGGAGATAT TGATGCAACC TGTACTAAGG TAAGAACTTA TACCCGCGGT
GACTATATCT ATACCGAAAC GCAGTATTAT CACGTTTACC GAAAGGTTAA CCTTAATTAT
TCCAATGTTC CAGCAGATGC CTCTGAAAAA ATGAATGACA ATTTAATGGA TCGTTTGGAG
CCTTATCAAA ATCATGATTT AATTACCTTC GAAATGCCAT ACCTAGCGGG ATATCTTGCT
GAAAAATATA ACTTTAATGC CGATCAAATC TTTCCGCGTG CTCGTGATAA AGTAGGTGGT
TTTGTGGACA ATTATCTAAG AAATACCATT CACGGATATC ATAGTGTTAT CACGAACCGA
AAAGATATTT CTATCTATAA AAAGAATGCC TATTATACTC TTTTACCGGT TTGGATGGTT
TGCTATGACT ATAAAGATTC GGAACATATC TTTGCTATGA ACGGTCAAAC AGGGAAGATT
GTTGGAAAAC CTCCTCTTTC TGTTCCAAAA ATGTTTGCAT GGTTCGCTTT AATTGCCTCC
TTATCATTTC TGATTATAAA ACTGCTTGTT GTTCTGAACG GAGGGCCTTG GTTATGA
|
|---|
| Protein sequence | MHTIFSAGIR HVIILYRKRE LLMVIQYKCP SCGADLTFDT TSKKLHCASC GSYYSIDSMP
PPDIPLGESD DAPKVNPFGP QDIYEEASFD YKQKSEWQHK DFSSSKVSEY HCKNCGAVVI
TDKDTIATSC SFCGAAVVLS DRIEGQLEPS RIIPFKINRD QATKAFQKWC KKGLLTPTEF
KHADRVKNIT GIYIPFWLYD LNGIGDIDAT CTKVRTYTRG DYIYTETQYY HVYRKVNLNY
SNVPADASEK MNDNLMDRLE PYQNHDLITF EMPYLAGYLA EKYNFNADQI FPRARDKVGG
FVDNYLRNTI HGYHSVITNR KDISIYKKNA YYTLLPVWMV CYDYKDSEHI FAMNGQTGKI
VGKPPLSVPK MFAWFALIAS LSFLIIKLLV VLNGGPWL
|
|---|
| |