Gene Cphy_3667 details

Gene Information

• Locus tag: Cphy_3667
• Symbol: rplC
• ID: 5742691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 4505269
• End bp: 4505904
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 641294777
• Product: 50S ribosomal protein L3
• Protein accession: YP_001560753
• Protein GI: 160881785
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000330884
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAG CAATATTAGC TACGAAGATT GGTATGACTC AAATCTTCAA TGAAAATGGA 
GTTTTAACTC CAGTAACAGT ATTGCAAGCT GGTCCATGTG CAGTTACTCA GGTTAAAACT 
GTAGATAACG ACGGATACGC AGCAGTACAG GTTGGCTTTG GCGACATCAG AGAAACACTT 
GTTAACAAGC CACAAAAGGG ACACTTTGCA AAAGCAGGTG TTGCAAATAA GAGATTTCTT 
AAAGAGTTCA GATTCGAAAA CGCTGCAGAC TACACTGTAG GTCAAGAAAT TAAGGTAGAC 
ATCTTCACTG CAGGTGATAA GATTGATGCT ACTGGAACTT CTAAGGGTAA GGGATTCCAG 
GGTGCTATTA AGCGTCACGG ATTATCCAGA GGACCTATGG GCCACGGTTC AAAGTTCCAC 
AGACATGCTG GTTCTAACGG TGCTGCTACA ACACCTGGTC GTGTATTCAA AGGAAAGCAC 
ATGCCTGGTC AAATGGGTAA CGTAAAAGTT ACAGTACAGA ACCTTGAAGT AGTCAAAATT 
GATGTTGACA ATAACCTTAT CTTAGTTAAA GGTGCTGTTC CAGGACCAAA GAAGGCTATG 
ATAATGTTAA AGGAAACAGT TAAGAGCGGT AAGTAG 

 

Protein sequence

MKKAILATKI GMTQIFNENG VLTPVTVLQA GPCAVTQVKT VDNDGYAAVQ VGFGDIRETL 
VNKPQKGHFA KAGVANKRFL KEFRFENAAD YTVGQEIKVD IFTAGDKIDA TGTSKGKGFQ 
GAIKRHGLSR GPMGHGSKFH RHAGSNGAAT TPGRVFKGKH MPGQMGNVKV TVQNLEVVKI 
DVDNNLILVK GAVPGPKKAM IMLKETVKSG K