| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3647 |
|---|
| Symbol | |
|---|
| ID | 5742671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4495093 |
|---|
| End bp | 4496421 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641294757 |
|---|
| Product | preprotein translocase, SecY subunit |
|---|
| Protein accession | YP_001560733 |
|---|
| Protein GI | 160881765 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00118801 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAA CGGTCAGAAA TGCCTTTAAG ATTAAAGATA TTAGAAACAA GCTTTTATTT
ACGTTTATGG TTTTGATTAT CGTACGTCTT GGTTCACAGC TCCCGGTTCC GGGAGTGAAC
CAGGCGGTAA TCGCCAATTG GTTACAGAAC AACTTCGGTA GTGGTCTTAG TTTCCTGGAT
TCCTTTACTG GTGGTTCCTT TACTAGAATG TCCTTATTTG CTCTTGGTAT CGGACCATAC
ATTACTTCCT CGATCATCAT GCAGTTATTA ACGATTGCAA TTCCTAAGCT AGAAGAGATG
CAAAAGGATG GAGAATCTGG AAGAAAGAAA ATCGCAGAAA TTTCAAGATA TGTTACTATT
GGACTATCTA TTATTGAATC TGTAGCTATG GTTATAGGCT TTAGTGGTTC AGGTGCTTTA
GAGGGTGGTT TAACCTTCAC TAACATTGTT GTCATTACTG CATCTTTCAC CGCTGGTTCC
GCAATTCTTA TGTGGTTAGG TGAAAGAATA ACTGAAAAGG GTGTAGGTAA TGGTATCTCT
GTCATCCTGT TAATTAACAT TGTTGCTAAT ATGCCAAGAG ATATCTATGG ATTAATCGAG
AAGTTTGTCC TTGGAGAAAG TGTTGTTAAG GGTGTAACTG CCGCTATCAT CATCGTCGCA
GTAATATTAC TATCTGTTGT ATTAATTATC CTACTTAATG CTGCACAGAG AAAAATCGCT
GTACAGTATG CTAAGAAGGT GCAAGGTAGA AAAATGGTAG GTGGACAATC CTCCCATATT
CCGTTAAAAG TAAATACTGC AGGTGTTATC CCAGTAATCT TTGCGGTATC TATCATGCAA
TTCCCTATTA TTATTGCTTC ATTCTTTGGA GTTCAGCCAG CTAGAGCTTA CTTCTGGCCA
AAGGTATTAC ACATGCTAAA CTCCCAAAGC TGGTTCAACA TTAAGAACGG TGAATTCAAA
TATACTGTTG GTGTACTTAT TTATATGGCA TTGATCGTAT TCTTTGCATA TTTCTATACA
TCCATTACTT TCAATCCAAT GGAAGTAGCA AACAATATGA AGAAACAGGG TGGCTTCATT
CCTGGTATTC GTCCAGGTAA GCCAACGACT GAGTACTTAA CAAAGGTTTT GAATTACATT
ATCTTTATCG GTGCAATTGG TCTTATGATT GTTGCAATTA TCCCGATTTT CTTCTCTGGT
ATGTTTGATG CACATGTATC CTTTAGCGGT ACATCATTAA TCATCGTAGT CAGTGTTGTA
CTTGAGACAA TGAAGCAGGT GGAATCACAA ATGCTCGTTC GTCATTATAA AGGTTTCTTA
AATGACTAA
|
|---|
| Protein sequence | MLKTVRNAFK IKDIRNKLLF TFMVLIIVRL GSQLPVPGVN QAVIANWLQN NFGSGLSFLD
SFTGGSFTRM SLFALGIGPY ITSSIIMQLL TIAIPKLEEM QKDGESGRKK IAEISRYVTI
GLSIIESVAM VIGFSGSGAL EGGLTFTNIV VITASFTAGS AILMWLGERI TEKGVGNGIS
VILLINIVAN MPRDIYGLIE KFVLGESVVK GVTAAIIIVA VILLSVVLII LLNAAQRKIA
VQYAKKVQGR KMVGGQSSHI PLKVNTAGVI PVIFAVSIMQ FPIIIASFFG VQPARAYFWP
KVLHMLNSQS WFNIKNGEFK YTVGVLIYMA LIVFFAYFYT SITFNPMEVA NNMKKQGGFI
PGIRPGKPTT EYLTKVLNYI IFIGAIGLMI VAIIPIFFSG MFDAHVSFSG TSLIIVVSVV
LETMKQVESQ MLVRHYKGFL ND
|
|---|
| |