Gene Cphy_3628 details

Gene Information

• Locus tag: Cphy_3628
• Symbol: rplM
• ID: 5742652
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 4478759
• End bp: 4479193
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 641294738
• Product: 50S ribosomal protein L13
• Protein accession: YP_001560714
• Protein GI: 160881746
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000132589
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCT TTATGGCAAG TCCAGCAACT ATTGAAAGAA AATGGTATGT AGTTGACGCT 
ACAGGACATA CATTAGGACG TCTCTCTTCT GAGATCGCAA AAGTTTTAAG AGGTAAGAAC 
AAGGCAATCT ATACACCACA CATCGATACA GGTGATTACG TAATCGTTGT CAATGCTGAC 
AAGATTAAGG TAACAGGTAA GAAGATGGAT CAGAAGATCT ACTTCAGCCA CTCTGATTAT 
CCAGGTGGAG TAAGAGAAAC TACATTAAAA GAAATGTTAG CAAAGAAGCC TGAAGATGTT 
ATCACTCTTG CAGTGAAAGG CATGCTTCCA AAGGGACCTT TAGGAAGATC TATGTTAAAC 
AAATTACACG TATACGCTGG TCCAGAGCAC AACAATGCAG CTCAGAAACC AGAAGTACTT 
GAAATCAAAT ACTAA 

 

Protein sequence

MKSFMASPAT IERKWYVVDA TGHTLGRLSS EIAKVLRGKN KAIYTPHIDT GDYVIVVNAD 
KIKVTGKKMD QKIYFSHSDY PGGVRETTLK EMLAKKPEDV ITLAVKGMLP KGPLGRSMLN 
KLHVYAGPEH NNAAQKPEVL EIKY