Gene Cphy_3621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3621 
Symbol 
ID5742645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp4472366 
End bp4472977 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content33% 
IMG OID641294731 
ProductTetR family transcriptional regulator 
Protein accessionYP_001560707 
Protein GI160881739 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.941769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG AGGAAAAAAC TGAATTAACA AAGGAAAAGA TAATTAATGC TGCAATCATA 
GAATTTGGTT TAAAAGGATA CGAAGGGGCA TCCCTAAATA ATATATGCAA CGATAATGGA 
ATTTCCAAAG GTCTTATCTA TCATAATTTT AAGAGTAAGG ATGAGATTTA TTTGATTTGC 
GTTAGAAGAT GTTTTGATAT GATAACGGCA TATTTACAGG AGCAAAACGT TAATAGTGAT 
ATGCATCAGT ATATGGAATT GCGATTTCGT TTCTTCTCAG AACATCCAGT GTACGCTCGA 
ATCTTTTTTG AATCGGTTTT ACAGTCACCA AAACATTTAA TAGAGGAGAT TAAAGAATTA 
AAAAAAGATT TTGATGAATT GAATATCAAA ATCTACCGTT TGGCGCTATC AAAATTAACT 
TTGAGGGATA GTGTTACCGA ACAGGAGGCG CTCGAGTATT ACAGCATGGT GCAGAATATG 
TTTCATGGTT TATTTCAATA TGGAGTTTTT CAAAATGAAG ATTACACTGC ACTTATAGAT 
GCACATGAAA CGAAACTTGC CAAAATACTT GATTTGATGC TCTATGGTAT CGCGAAGGAG 
GGAAAAGAAT GA
 
Protein sequence
MKKEEKTELT KEKIINAAII EFGLKGYEGA SLNNICNDNG ISKGLIYHNF KSKDEIYLIC 
VRRCFDMITA YLQEQNVNSD MHQYMELRFR FFSEHPVYAR IFFESVLQSP KHLIEEIKEL 
KKDFDELNIK IYRLALSKLT LRDSVTEQEA LEYYSMVQNM FHGLFQYGVF QNEDYTALID 
AHETKLAKIL DLMLYGIAKE GKE