| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3615 |
|---|
| Symbol | |
|---|
| ID | 5742639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4463242 |
|---|
| End bp | 4464726 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641294725 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001560701 |
|---|
| Protein GI | 160881733 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTTT CTGCATTTTT ATTTTTTATA GGGGAAGCAG TGTATCGCAT TCTTTGTAAG
GGAATTCTCC TTATAGTAAC ACTGATATTT CTTATACTTA TTATTGCGGT AATTCGAGCA
CTGATATTAA AACCTACGTC TGCAAAGACT GCATCCATTG ACTATCCAAA AGATAACAGG
TCCATGGAGT ATGCGAAGAA GCTTTCTAAG ATGATTCAGT GTGAAACAAT TTCAAACCGG
TATGACAATG ATATTGCAAA ATTTTATAAG TTGCATGAAG TACTGGAAGA GTTATATCCA
TCTGTACATA AAAAGTGTGA AAAGCATGAA ATGAATGGGA ACCTTCTATT CTGTCTGAAA
GGAAAAGGAA ATGCAGAGCC GATCCTACTT ATGAGTCATC AAGATGTTGT GGAAGCAACG
GGAACTTGGG AGCAGGATCC ATTCAGCGGA TTGATTAAGG ATGGTGTTAT CTGGGGAAGA
GGAACTGTAG ACACGAAGGG AAGCCTTAGT TGTATTTTAC AAGCAGTAGA AGAATTAATT
GATAGTGGAT ATGAGCCGGA AGGTGATGTT TATATTGCTA GTAGTTGCAC GGAGGAGTTT
TCTGGAGATG GAGCCCCTTC CATCGTGGCA TATTTAAAGC ATCGTAGAAT TAAATTAGCG
ATGCTTGTAG ATGAAGGTGG TATGATTATA GAAGAGCCGC TTGGTGGTGT AAAAGGTCTA
TATGCAATGG TTGGAGTATT AGAAAAGGGT TATGGTGATA TTAAATTTAC TGCTAGAAGT
AATGGTGGTC ATGCAAGTGC ACCAGGTAGA AATACTCCAT TGGTTCGTCT TGGTAAATTT
ATGACTAAGA TGGAGAAGAG AAATCCTTTC CGTAAAGAAT TTAACCCTAC AGTAAAAGAA
ATGTTTCATC GATTGGCACC GAATACTGGT TTTGGTCTTC GTCTTGTGTT TGCTAATCTT
TGGTTATTTG GTCCGTTATT TAAGAGAGTG ATGAGACGAA TTAATTCGAC GGGATCAGCT
TTACTTCAGA CAACGATGGC ATTTACCACT GCAAAAGGTT CGAATGGGCT GAATGTATTA
CCACAAGAAG CATACGTTAC TGCCAACATG AGATTTATTC CGCATCAAGG AACAGAGGAA
AGCATTGAAC TTGTAACCAA ATTTGCGAAA GAATATGATC TTGAGACGGA GGTTATCCAT
AAGGATTATC CACGTCCGGT AGTTGACTTC AAAGGAGAAG CTTTTGTTAA GGTGGAAAAA
GCAATTGAAA AGTTATTTCC AGACGTAGGG GTTGTGCCAT ATGTTATGAC AGTTGGAACA
GATGCAAGAT TCTTCAGCGA CATTTGCAAC AACTGCATTC GCTTTGCTCC GCTTTATATT
AATAAGCAGC AATTTGCAAG TATTCATGGC CTCAATGAGA ATCTTAATGT AGAGGTATTA
TCAAAGGCGG TGGATTTTTA TAAGGAGATT GTTTATAACA TGTAA
|
|---|
| Protein sequence | MVFSAFLFFI GEAVYRILCK GILLIVTLIF LILIIAVIRA LILKPTSAKT ASIDYPKDNR
SMEYAKKLSK MIQCETISNR YDNDIAKFYK LHEVLEELYP SVHKKCEKHE MNGNLLFCLK
GKGNAEPILL MSHQDVVEAT GTWEQDPFSG LIKDGVIWGR GTVDTKGSLS CILQAVEELI
DSGYEPEGDV YIASSCTEEF SGDGAPSIVA YLKHRRIKLA MLVDEGGMII EEPLGGVKGL
YAMVGVLEKG YGDIKFTARS NGGHASAPGR NTPLVRLGKF MTKMEKRNPF RKEFNPTVKE
MFHRLAPNTG FGLRLVFANL WLFGPLFKRV MRRINSTGSA LLQTTMAFTT AKGSNGLNVL
PQEAYVTANM RFIPHQGTEE SIELVTKFAK EYDLETEVIH KDYPRPVVDF KGEAFVKVEK
AIEKLFPDVG VVPYVMTVGT DARFFSDICN NCIRFAPLYI NKQQFASIHG LNENLNVEVL
SKAVDFYKEI VYNM
|
|---|
| |