| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3603 |
|---|
| Symbol | |
|---|
| ID | 5742627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4450172 |
|---|
| End bp | 4451374 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641294713 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_001560689 |
|---|
| Protein GI | 160881721 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000021314 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAG CAGTGTTAGG ATTTGGAACC GTAGGTTCTG GAGTATATGA AGTAATAAAA
ACAAATTATG AAACTATTAC AAAACGTGCT GGTGAAGTAG TTGACATTAA ATATGTGCTG
GATTTAAGAG ATTTTCCAGG AAATCCTGTT CAGGATATCA TTACTCATGA TTTTAGTGTA
ATTGCAAATG ATCCAGAAAT TAAGATTGTT GTTGAAGTTA TGGGTGGTGT AGATCCTGCT
TATTCTTTTG TGAAGGAAGC CTTATTAAAA GGGAAATCTG TCTGTACTTC CAACAAGGAA
CTAGTAGCAA AACATGGAGC AGAACTATTG GAGATAGCAA AACAAAAGAA GATTAACTTT
TTGTTTGAAG CTAGTGTTGG CGGTGGTATA CCGATTATTC GTCCTTTGAA TCAATCCTTA
ACAGCGGATG AGATCGATGA AATAACAGGT ATCTTGAATG GTACTACAAA CTATATTTTA
TCAAAGATGA AAACGCAAGG ATCTGAGTTT GCAACCGTTC TTAAGGAGGC TCAAGAGCTT
GGTTATGCAG AACGTAATCC AGAGGCCGAT GTCGAAGGTT TTGATGCTTG CCGTAAAATT
GCGATTCTTA CCTCGCTTGC ATATGGAATG CATGTTGATT TCGAACAGAT TTATACTGAA
GGAATTACGA AGATAACAGC AGAGGATATT AAGTATGCCA ATGCGTTAGA TGCTAGCATT
AAATTATTAG CGACCAGTAA AAACGTTGAC GGTAAGGTGT ATGCGATGGT TGCTCCTAAG
ATGATAAACG ATAAGCATCC ATTATTTTCT GTAAATGATG TATTTAACGG AATACTTGTT
AAAGGAAATT TATTAGGTGA TGTTATGTTC TATGGAAGCG GAGCAGGCAA ACTTCCAACA
GCAAGTGCAG TTGTTTCTGA TGTTGTAGAT GCAACCAAAC ATATGGGAAT CAACATTATG
ACATTATGGA GCAGCAAACA TCTAATTCCA GCGGATATGA GTACCTATGA GAGTAAATTC
TTTGTTCGTG TACCTTTAGG GGAAGAGGAG ACTGCAAAAG AATTATTTAA GATTGCAAAG
GTTGTTTCAG TACCTGATAT AGACGGAGAG TATGCATTTA TCACGGAGAA GATGACGGAA
GGAGCTTTTG AAGAGGCAGC GAAGAAGCTA TCGATAATTA ACCGTATTCG TGTGGAATTT
TAG
|
|---|
| Protein sequence | MKIAVLGFGT VGSGVYEVIK TNYETITKRA GEVVDIKYVL DLRDFPGNPV QDIITHDFSV
IANDPEIKIV VEVMGGVDPA YSFVKEALLK GKSVCTSNKE LVAKHGAELL EIAKQKKINF
LFEASVGGGI PIIRPLNQSL TADEIDEITG ILNGTTNYIL SKMKTQGSEF ATVLKEAQEL
GYAERNPEAD VEGFDACRKI AILTSLAYGM HVDFEQIYTE GITKITAEDI KYANALDASI
KLLATSKNVD GKVYAMVAPK MINDKHPLFS VNDVFNGILV KGNLLGDVMF YGSGAGKLPT
ASAVVSDVVD ATKHMGINIM TLWSSKHLIP ADMSTYESKF FVRVPLGEEE TAKELFKIAK
VVSVPDIDGE YAFITEKMTE GAFEEAAKKL SIINRIRVEF
|
|---|
| |