Gene Cphy_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3598 
Symbol 
ID5742623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4444788 
End bp4445633 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content37% 
IMG OID641294710 
ProductABC transporter related 
Protein accessionYP_001560686 
Protein GI160881718 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGCAA TTGAGATGGA ACATATCTCA AAAGATTTTG GTGAGAAAAA AGTCTTAAAG 
GATTTGAATA TTAAAGTAGA GCAAGGAGAA GTCTTTGGAT TACTTGGGCC ATCCGGAGCC
GGGAAAACAA CTATGATAAA GATTATGACC GGGCAGTTGA AAAAGACCAA GGGAAATTCA
AGATTATTAG GGGAAGAGTC ATTAAAACTT AGTGATAAGA TATACTCACA AATTGGAGTT
GTATCGGATA ATAGTGGCGT ATATGAAAGA ATGAACTGTT ATGAGAACTT AGAGTTTTTT
GCTAAGCTAA ACCAGGTCCC GAAAGAAAGA ATCCATGAGG TATTATTAGC AGTAGGTTTA
GAGAAGGAAA AGAAAACCAA AGCAAAGAAA TTATCAAAAG GTATGAGCCA GCGTTTGAAT
TTAGCAAGAG CGGTACTTCA TAACCCTAAG ATTTTATTTC TTGATGAGCC AACCAGTGGA
TTAGACCCGG CAACAGCTAC GATGATACAT AGGCTATTGT TATCGTTAAA AGACCAAGGG
ATGACCATAT TTTTAACAAC TCATAACATG GAGGAGGCAA CGAAACTCTG CAACCATGTT
GCTTTATTAA ATGAGGGAAC CATTGTTGAA TTTGGGGAAC CAAAAGAACT CTGCCGTAAA
TATAACAAAG AAAATAAAAT TACGATAACA ACAAAGGATC GAACGGAAAT TATACTTTCT
AATCATCCTT CGGATGCAGA TAAGGTTGCT GATTTATTAC GTGAAGGAAT GGTGGAATCG
ATTCATTCTT CAGAACCAAA TTTAGAAACC GTGTTTTTAG CGTTAACAGG AAGGGGGCTG
TTATAA
 
Protein sequence
MYAIEMEHIS KDFGEKKVLK DLNIKVEQGE VFGLLGPSGA GKTTMIKIMT GQLKKTKGNS 
RLLGEESLKL SDKIYSQIGV VSDNSGVYER MNCYENLEFF AKLNQVPKER IHEVLLAVGL
EKEKKTKAKK LSKGMSQRLN LARAVLHNPK ILFLDEPTSG LDPATATMIH RLLLSLKDQG
MTIFLTTHNM EEATKLCNHV ALLNEGTIVE FGEPKELCRK YNKENKITIT TKDRTEIILS
NHPSDADKVA DLLREGMVES IHSSEPNLET VFLALTGRGL L