Gene Cphy_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3577 
Symbol 
ID5742981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4416402 
End bp4417319 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content30% 
IMG OID641294688 
ProductABC transporter related 
Protein accessionYP_001560665 
Protein GI160881697 
COG category[R] General function prediction only 
COG ID[COG4152] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCAT CAAACAAAGT AATTCAACTT AAATCTGTAA ATAAACTATA CAAGAAAGGT 
AATGTAATAG CGCTCAATGA TGTTTCTTGT GAGATATGTG AAGGTGAGTT AGTTGGAGTG
TTGGGTCGGA ACGGTGCTGG GAAAAGTACT ATGTTTAAAA TAATTGCCGG AGTTTTAAGT
GACTATAGCG GCAAATGTGA AGTATTTGGA AATCAGAGTA ATAGAGGAAA CGCTAATGTA
GTAAGTTATT TACCTGAAAC AAGAGGTTTA AATGGAAGAA AAGATGCTTT AGAACATCTA
GTCGACATGG TCAGCTTTAA AGGGATCGAT AGAAAAAAAT CCAAAAAAAA TGTTTTATTT
TGGCTTGAGA AATTTAATAT GTTAGATTAT CAAAATAGTA GAATTGATTC TCTATCAAAA
GGAAATCAGC AAAAGCTCCA GTTAATTACT AGCATCGCTT GTAATCCTAA AATACTTATT
TTAGATGAGC CTTTTAGTGG TTTGGACCCT ATTACTGTTG ATTTTTTTTG GAAAATATTA
TTAGAACTGA AAGCAAATGG GACAACCATT ATTTTTTCTA CACATATTTT TGATGATAAA
ATGCTAGAGT GTGATAAGTT CATTTTTATT GTTAAAGGTG AAATAAAAGA AAATGGAACC
TTACAACAAC TAAATGAAAA ATATCCAATG GTATTAGAAC TTGAGAATGA TAGTTTAGCA
ATTGAAATGA TTAAAAATAA ATACGGTGAC GAGAATGTAA AATTAGCCAA TGGGGTGTTA
TTTATTTACA TTGAAAATGA GTCGCAAGCG AGAGAAATTT TTGATATCTT ATCTGATAAG
TTTTCTAAAC GATTTTATAT TAGATATATG AGCTTAGGAG AAATTTTTAG AAAGGTAAAT
GGTATTAAAA ATGAATAA
 
Protein sequence
MIASNKVIQL KSVNKLYKKG NVIALNDVSC EICEGELVGV LGRNGAGKST MFKIIAGVLS 
DYSGKCEVFG NQSNRGNANV VSYLPETRGL NGRKDALEHL VDMVSFKGID RKKSKKNVLF
WLEKFNMLDY QNSRIDSLSK GNQQKLQLIT SIACNPKILI LDEPFSGLDP ITVDFFWKIL
LELKANGTTI IFSTHIFDDK MLECDKFIFI VKGEIKENGT LQQLNEKYPM VLELENDSLA
IEMIKNKYGD ENVKLANGVL FIYIENESQA REIFDILSDK FSKRFYIRYM SLGEIFRKVN
GIKNE