Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3573 |
Symbol | |
ID | 5742977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 4412453 |
End bp | 4413352 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641294684 |
Product | ROK family protein |
Protein accession | YP_001560661 |
Protein GI | 160881693 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.406671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA TCGCACTTGA TATTGGCGGT ACCGCTATCA AATATGCCTA CTTTGATGGA GATGATTTGA TCTTTGATGA CGTACGACCT TCCGAAGCTT CGCTTGGTGG TGATAAGGTA TTAGAAAACA TTATTTCCAT CATTACGGAG ATTGGTAATC AGCATTCTTA TGATACCATT GGTATCAGCA CCGCAGGTCA GGTAGACTCT ATAAATGGAA CAATCGTTTA CGCAAATGAT AATATTCCGA ACTATACCGG GATGGAATTA AAGAAAATTC TAGAAGATAA ATTTAAGGTT CCAGTTAGCG TTGAAAATGA TGTCAATGCT GCAGCTATAG GAGAAGCTAT CTATGGCGCC GGAAAAGGAG AGAATGACTT TCTATGCCTA ACATATGGCA CAGGAATTGG TGGTGCTATC TTTTTAAATC AAAAGCTTTA TAAGGGAGCG CAAGGTGTTG CAGCTGAAAT GGGTCATATG ATGATTCACC CTGGTGGCTT ACCATGTGGC TGCGGCTCCT TTGGTTGTTA TGAGCAATAT GCTTCCACCA CAGCTCTTAT TCGAACAGCG AAAGCACATA GCCCTGAGTT TTATAATGGT AAGGCTATTT TTTCTGCCTT TGACCACGAT AGTAAAGATG CAAAAAGACT CATTGACCAA TGGGTAAAAG AAATCAGCTA TGGATTGGTT AATTTGATTT ATATCTTTAA CCCTTCCTTA ATAGTTCTTG GTGGTGGAAT TATGACTCAA CCTTATATCA TCAATAAACT AAATCAAATC ATTAAGGAAA GTACGATGCC AAGCTTTCAT GGTGTTAGGG TAACCCTAGC CTCCTTGGGT AATCTCGCAG GAGTATATGG CATGAAGGCG ATTACATCAA AAGAGTATCA GGAAAAATGA
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Protein sequence | MKIIALDIGG TAIKYAYFDG DDLIFDDVRP SEASLGGDKV LENIISIITE IGNQHSYDTI GISTAGQVDS INGTIVYAND NIPNYTGMEL KKILEDKFKV PVSVENDVNA AAIGEAIYGA GKGENDFLCL TYGTGIGGAI FLNQKLYKGA QGVAAEMGHM MIHPGGLPCG CGSFGCYEQY ASTTALIRTA KAHSPEFYNG KAIFSAFDHD SKDAKRLIDQ WVKEISYGLV NLIYIFNPSL IVLGGGIMTQ PYIINKLNQI IKESTMPSFH GVRVTLASLG NLAGVYGMKA ITSKEYQEK
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