Gene Cphy_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3549 
Symbol 
ID5742953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4382754 
End bp4383056 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content38% 
IMG OID641294660 
Productphosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_001560637 
Protein GI160881669 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0189328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGTG CAGGAATGGA GGTAGAGATG ATTAGCGGTA AGGTTGTAAT TAAAAGTGAA 
ACAGGTCTTC ATCTTAGACC AGCCGGGGAT CTATGTAAAT TAGCTATGAA ATTTCCATGC
AAGATAGAAA TGAAACTAGG CAATCGTACC GTAAATGCAA AGAGTGTATT GGGTGTTTTG
TCAGCATGTA TCAAGTTTGG TGATGAAGTT GAGGTTATCT GCGATGGTGA GAATGAGGAG
GAAGCATTTG ATAAGATGGT AGATGCTCTA GAATCTAAAT TCGTAGAATA TCACGAAAAA
TAA
 
Protein sequence
MLSAGMEVEM ISGKVVIKSE TGLHLRPAGD LCKLAMKFPC KIEMKLGNRT VNAKSVLGVL 
SACIKFGDEV EVICDGENEE EAFDKMVDAL ESKFVEYHEK