| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3548 |
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| Symbol | |
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| ID | 5742952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4380908 |
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| End bp | 4382578 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294659 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001560636 |
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| Protein GI | 160881668 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.180442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATT ATAAGAGATA TCAAAAAAAT CCTGTAGTTA CGTATCCAGA GCGTGAATGG
CCAAACAAGG AGATTGTCAA AGCACCAATA TGGTGTAGTG TTGATTTAAG AGATGGCAAT
CAAGCTTTGA TCGAACCAAT GGTTGTAGAA GAAAAAATAG AATTTTTTAA CCTATTAGTC
AAACTAGGTT TTAAGGAAAT TGAAGTTGGA TTTCCAAGCG CGTCCCAAAT TGAATATGAT
TTTTTAAGGC AGTTAGTTGA CCGTAAATTA ATACCGGATG ATGTTATCAT ACAAGTTCTG
GTACAGTGTA GAGATCACTT AATCCAAAGA ACTTTTGAAG CTCTCCAGGG AGTAAAACAA
GCGGTAGTAC ATATTTACAA CTCAACCTCT ACTCTGCAGA GAGATGTTGT ATTTCACATG
AACCGTGAAG AAATCACTCA TATTGCAGAG CAAGCAACGA GGTTAGTCAA GGAATATGCA
AAGGATTTTG AGGGCAAAAT CATATTAGAG TATTCACCGG AGAGTTTCAC CGGAACAGAA
CTCGATTTTG CGTTAGAAAT CTGTACAGCG GTTCAAGAGA TTTGGAAACC GTCAATAGAG
AACAAGATAA TAATAAACCT GCCTGCTACG GTGGAAATGA ATACACCGAA TGTATATGCA
GACCAGATTG AATGGATGTC AAAACATTTA AAAAGCAGAG AAAGCATTAT CCTAAGTGTA
CATCCTCATA ATGATAGAGG TACGGGAGTT GCCAGTACAG AATTAGCGAT TCTTGCTGGT
GCGGACCGTG TGGAAGGTAC CTTATTTGGT AATGGAGAAC GTACTGGTAA TGTTGATATC
TTAACGATTG CCTACAATAT GTTTTCTCAA GGAATTGATC CTAAACTAAA TATTGAAAAT
ATCAATGATA CCATAGAAAT CTATGAACGC TGTTGTAAAA TGCAAGTACC TCCAAGACAT
CCGTATGCAG GGAAATTAGT GTTTACTGCA TTTTCCGGCT CCCATCAGGA TGCTATTAAC
AAGGGAACAA AAGCCATGAA GGATAGAGAC AGGGAATTCT GGCAAGTACC TTATTTGCCA
GTTGATCCGG CCGATATTGG CAGATGCTAT GAACCGATTG TTCGTATTAA CAGTCAATCC
GGAAAAGGTG GCGTAGCCTT TATTATGGAA ACTTATTTTG GATATAAGTT ACCTAAGGCA
ATGCACAAGG AATTTGCAGA TGTAATTCAA CGAATTTCCG AAAAGCAGGG AGAAGTAGCT
CCGGAGCAAA TTATGCAGGA ATTTAAAAAC TGCTATCTGG AACGAATGGA ACCACTTCAT
TTTGTACGCT GCAAGATGGA GGATGTGACT GATTCGAATG ATACCTATGA TACTATTGTT
ACAGTTACCT ACTGTCACAA TGGTGAAGAG AAGGTATTTC ATGCTACCGG CAATGGTCCG
ATTGATGCAG TACATCATGG ATTACAAGAT GTTGTCGAGA AGAAAATTAA GATTCTAGAT
TATAGTGAAC ATGCCCTTGG AGAAGGTGCA AATGCTAGGG CAGCAGCTTA TATTCATGTA
ATGGATAAGG AATCTGGAAA AGCTGCCTTT GGTGTCGGCA CCAGTTCCAA TATTACAAGA
GCTTCTTTAA GAGGTTTATT CAGTGCAATT AACAGGTTGT ATTACTTATA G
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| Protein sequence | MINYKRYQKN PVVTYPEREW PNKEIVKAPI WCSVDLRDGN QALIEPMVVE EKIEFFNLLV
KLGFKEIEVG FPSASQIEYD FLRQLVDRKL IPDDVIIQVL VQCRDHLIQR TFEALQGVKQ
AVVHIYNSTS TLQRDVVFHM NREEITHIAE QATRLVKEYA KDFEGKIILE YSPESFTGTE
LDFALEICTA VQEIWKPSIE NKIIINLPAT VEMNTPNVYA DQIEWMSKHL KSRESIILSV
HPHNDRGTGV ASTELAILAG ADRVEGTLFG NGERTGNVDI LTIAYNMFSQ GIDPKLNIEN
INDTIEIYER CCKMQVPPRH PYAGKLVFTA FSGSHQDAIN KGTKAMKDRD REFWQVPYLP
VDPADIGRCY EPIVRINSQS GKGGVAFIME TYFGYKLPKA MHKEFADVIQ RISEKQGEVA
PEQIMQEFKN CYLERMEPLH FVRCKMEDVT DSNDTYDTIV TVTYCHNGEE KVFHATGNGP
IDAVHHGLQD VVEKKIKILD YSEHALGEGA NARAAAYIHV MDKESGKAAF GVGTSSNITR
ASLRGLFSAI NRLYYL
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