Gene Cphy_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3544 
Symbol 
ID5743656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4376510 
End bp4377697 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content36% 
IMG OID641294655 
ProductCDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 
Protein accessionYP_001560632 
Protein GI160881664 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAAC GAATTAAGAG GCTAACGCCA AAAGCTATTA TTGAATTATA TAAAGGAATA 
CGGTATGGTT TCATTACCGT ATTCTTTTAT CTGTTTCGAA TCTTCCCGAT AAGGAAGAAT
CGAATCGTAT TGATGAATGT TTGGGGATTC GGCGACAATG TAAAATATGT GACGGAAGAG
CTTATAAGCA GAAAGAAACC TTATGAGCTT ATTTTTATAT GTAATCGTCC AGAGAATGTA
ACCATATCAA AATCGGTAAA GATAAAAAAG ACAAATACAT TATCTGCAAT CTATGCACTT
GCTACCGCTA AGGTGTGGGT CGAGAGTAAC CGAAAAGAAG GTTATATTAA GAAGCGGAAG
AACCAGTATT ATATACAGTT GTGGCATGGA GGATTTGCGC TAAAGAAAAT AGAAGGCGAT
TGTGAAGATT ATCTCGGTGA AACTTATATT AAACGTGCAA AGAAGGATTC TTTGATGACG
AATTTGTATG TATCTAACAG TACTTATTGT ACCAAGATGT ACCGGAGAGC GTTTTGGTTT
ACTGGTGAAA TAGCAGAGTG GGGAAGCCCT CGAATGGACC TTTTACTTTC CCAAAATGAG
AAATTAAAGA ATCAGATCAA AGCAAATTTA GGTATTGATA AGACAAAAAA GGTTGTACTG
TATGCACCAA CCTATCGAAG TTCAGAAGAT TTATCGGTGT ACGAACTTCA TTATGATACT
CTCTGTAGTG AGTTATCGAA GAAATTTGGA GGAGAGTTCG TTGCAATTGA GCGCCTCCAT
CCACTGGTTA GAGAACAAAG TACACAGTTA AAGAAACTAG GAAACCGTAT CGATGCAAGT
TCTTATAAAG ATATGTATGA ACTGATGTTA ATTGCAGACG TATTAATAAC AGATTATTCA
AATACCATGT TTGAATTTGC TTTGATGAAT CGTCCAGTCT TTTTATACGC GAAAGATTAT
AAAAACTATA AGGAAGAGAG AGGTTTCTAT TTTGATTTTC CTACACTTCC GTTTCCGATC
GCTTATACGG AAGGAGAGTT AAAGGATAAG ATTAGACATT ACGAGGATTC AGAACAAGAA
GTAGTGAAAC GATTTTTAGC GGAACTTGAA GTAAAAGAAA CAGGAGCAGC TTCTATAAAG
GTAGCTGATC GCATTGATCA AGTGATAAAA AGAACTTATA AGAAGTAA
 
Protein sequence
MRERIKRLTP KAIIELYKGI RYGFITVFFY LFRIFPIRKN RIVLMNVWGF GDNVKYVTEE 
LISRKKPYEL IFICNRPENV TISKSVKIKK TNTLSAIYAL ATAKVWVESN RKEGYIKKRK
NQYYIQLWHG GFALKKIEGD CEDYLGETYI KRAKKDSLMT NLYVSNSTYC TKMYRRAFWF
TGEIAEWGSP RMDLLLSQNE KLKNQIKANL GIDKTKKVVL YAPTYRSSED LSVYELHYDT
LCSELSKKFG GEFVAIERLH PLVREQSTQL KKLGNRIDAS SYKDMYELML IADVLITDYS
NTMFEFALMN RPVFLYAKDY KNYKEERGFY FDFPTLPFPI AYTEGELKDK IRHYEDSEQE
VVKRFLAELE VKETGAASIK VADRIDQVIK RTYKK