| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3536 |
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| Symbol | |
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| ID | 5743648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4365578 |
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| End bp | 4366744 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641294647 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001560624 |
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| Protein GI | 160881656 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000357876 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA GTCTAAAAAA ATTAGCAAGT TTAAGTCTTG CGACAGCTAT GGCGATATCC
TTGGTTGGTT GCGGTACTAA GGAGGGTGGA TCTACACCCG GCAATGAAAA TGGTAGTGGA
GCAGCTACTT TTAAAATCGG GGGTATTGGA CCATTGACAG GAGAGGCTGC ATCTTATGGT
ATCTCTGTTA AAAATGGTGC AACGATAGCA ATCAAAGAAA TTAACGATGC AGGTGGTGTA
ACAGTTGGCG ATAAGAACTA CATATTAGAG ATGAATTTTG CGGATGATCA AGCATCTCCT
GAAATTGCAG TCACAGCGTT TAATACGGTG ATGGATTGGG GAGCACAAGC AATTCTTGGT
TCAGTAACCT CTGGTTCTTG TCTTGCTATT AGGAAGGATA CTTTTGAAAC AGGAATTTTT
CAGCTCACAC CTTCTGGATC TGCAGCTGAA TGTACGGAAT ATGAGAATGC CTTCCGCTTA
TGTTTTACTG ATCCATTACA GGGTGTAACT CTTGCTAATC TTGCAAAGGA ATTAGGTTAT
GAGAAAATTG CTATTATTTA CAATAACTCT GATGAATACA GTACCGGTGT TATGCAAGCA
TTTTCCGAGC AGGTAACTTT AAATGGCGGA ACTATTGTTG CTTCTGAAGC CTTCGCAAAG
AATGCAATTG ATTTTAACAC TCAATTAACA AAGATTAAGG CAACGGATGC AGAAGTAATC
TTCGTACCTG CTTATTATAA TGATGCGGCG TACATTACAC AGCAGGCAAG TGATCTTGGT
ATGAATCTTC CATTCCTAGG TAGCGATGGA TGGGATGGTG TATTAGCGCA AGTTAAGGAC
CCAGCTGTTC TTGAAGGTGC AATCTTTTTA AGCCCATTCT TTGCTAGTGA TGAAGCTCCT
GTACTTAAGA AATTTGTAGA GACTTATCAG TCAAATTACA ATGCGGTACC AGATCAGTTC
GCGGCAGATG GCTATGATAG TGTATATGTA ATAAAGGCAG CTCTAGAAAA AGCTTCTTCT
GTAGATAGCA AAGATATGAT TTCTGCAATG ACACAAATTA CAGTAGATGG TCTTACTGGT
AGTGTATCCT TTACCGCAGA TGGTGAGCCA AATAAAGGTG CGAAATACAT CGAAATTAAG
GATGGCAATT ATACTTCAAG ACAGTAA
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| Protein sequence | MKKSLKKLAS LSLATAMAIS LVGCGTKEGG STPGNENGSG AATFKIGGIG PLTGEAASYG
ISVKNGATIA IKEINDAGGV TVGDKNYILE MNFADDQASP EIAVTAFNTV MDWGAQAILG
SVTSGSCLAI RKDTFETGIF QLTPSGSAAE CTEYENAFRL CFTDPLQGVT LANLAKELGY
EKIAIIYNNS DEYSTGVMQA FSEQVTLNGG TIVASEAFAK NAIDFNTQLT KIKATDAEVI
FVPAYYNDAA YITQQASDLG MNLPFLGSDG WDGVLAQVKD PAVLEGAIFL SPFFASDEAP
VLKKFVETYQ SNYNAVPDQF AADGYDSVYV IKAALEKASS VDSKDMISAM TQITVDGLTG
SVSFTADGEP NKGAKYIEIK DGNYTSRQ
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