Gene Cphy_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3535 
Symbol 
ID5743647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4364454 
End bp4365329 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content36% 
IMG OID641294646 
Productinner-membrane translocator 
Protein accessionYP_001560623 
Protein GI160881655 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.152281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTTA TAGAACAATT GATTAATGGA TTAAGAACTG GAAGTATATT TGCTTTGATA 
GCAATCGGTT ATACCATGGT TTATGGTATC GCAAAGATGA TTAACTTCGC GCATGGTGAC
ATTATCATGG TGGGAGCATA TTCTTTATAT ATATTTATTG AAAAACTTAA CCTACCTCCA
GTAGTAGCAG TTATATTTAC AATGTTAGTA TGCACCATAC TTGGTATTAC CATTGAAAAA
GTGGCATACA AACCACTACG TAAGGCTCCA TCCTTAGCGG TTTTAATTAC TGCTATCGGT
GTTAGTTACT TATTACAAAG TGTAGCTCTT TTGATATTTA AAGCTACTCC AATTCCTTTT
TCTACTTTTA TTGAGGTACC TGCTTTACAT ATCGGGAAAA TAACCATTTC TGGTATTACG
ATAGTTACCT TTATAGTAAC TACAGTATGC ATGATTTTAC TAACCTTATT TGTTAATCAT
ACGAAGATTG GTAGTGCAAT GAGAGCAGTA TCGGAAGATA AACAGGCTGC GCAGCTTATG
GGAATTAACG TGAATCGAAC CATATCGATT ACGTTTGCAA TTGGGTCCAT GCTTGCAGCA
ATAGCTGGTA TCCTTTTTAT TAGTCAGTAT CCATCTCTAA GACCAACGCT TGGAACCTTG
CCAGGTATCA AAGCTTTCGT TGCAGCGGTA TTTGGTGGTA TTGGTAGTAT TCCGGGAGCT
ATGCTTGGTG GACTTTTATT AGGTGTAATT GAAAGCTTAA GTAAAGCATA TATCTCAACA
GAACTTGCAG ATGCTATCGT ATTTGGCATT CTTGTACTTG TCTTACTTGT AAAACCATCT
GGGTTACTTG GCAAGAATAG AATTGAGAAG GTGTAG
 
Protein sequence
MVFIEQLING LRTGSIFALI AIGYTMVYGI AKMINFAHGD IIMVGAYSLY IFIEKLNLPP 
VVAVIFTMLV CTILGITIEK VAYKPLRKAP SLAVLITAIG VSYLLQSVAL LIFKATPIPF
STFIEVPALH IGKITISGIT IVTFIVTTVC MILLTLFVNH TKIGSAMRAV SEDKQAAQLM
GINVNRTISI TFAIGSMLAA IAGILFISQY PSLRPTLGTL PGIKAFVAAV FGGIGSIPGA
MLGGLLLGVI ESLSKAYIST ELADAIVFGI LVLVLLVKPS GLLGKNRIEK V