Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3534 |
Symbol | |
ID | 5743646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4363443 |
End bp | 4364444 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641294645 |
Product | inner-membrane translocator |
Protein accession | YP_001560622 |
Protein GI | 160881654 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAGA ATAAGAAAAG ACGGAATCTA ATAAATGCGG TGATTGCTTT TGCTGCAATT ATCCTTGGAT ATATGGCTGT TTATTTCATG ATGGAAGGGA ATATCTTAAG CCGTCAGATG ACATCCTTAA TACCTAGAAT TGGAATTAAC ATTATTCTAG CGGTATCCTT AAGTATTACG GTAGGATTAT TAGGGGAATT GTCTCTTGGT CATGCTGGAT TTATGGCGAT AGGAGCTTAT TCCAGTGCTA TCTTTACTAC GCAGGCGGTA GGACTCCCAG GATTTTTATC CTTTATCATA GCACTTCTCA TTGGTGGTAT TATGGCTGCA TTATTTGGCG TGATTACTGG AATACCAGTA CTTCGTTTAC GTGGGGATTA CCTTGCGATT GTTACTCTGG CTTTTACAGA AATTATTCGT TCTATCATCA ATTCTATGTC AATTACTGGT GGTGCAATGG GATTATCTAA GATTCCGGAT TATGCGAATT ATACTTGGAT TTATATCTTT GGTATCTTAA CAATTTTGGT AGCGGTAAAT TTAAAGAATT CAAGGCATGG AAGAGCGATT CTATCCGTTC GTGAGAATTA TGTAGCAGCT GAAGCTATGG GAATACCTGT TACTAAGTTT AAGATTCTCG CATTTACAAT AGCAGCTTTT TTTGCTGGAA TAGCTGGTGC ATTATATGCG CATACCTATA GTGTACTACG ACCTAATAGT TTTGATTATA ACAAATCAAT TGATATATTA ATATTTGTTG TACTTGGTGG TATGGGAAAT ATTCCGGGTA CTATCGTTGC AACGATTCTT TTAACCTACC TTCCGGAGAA ATTCCGTGAG TTTGGTGACT ACCGTATGCT AACGTATGCA CTTGCATTGA TAATTATTAT GATTCTTAAT TCTGGTGAGA TGAAAGAAAA GATAAAAGGT TTCTTTGGAA AAATAGTACC CTTTGGTAAA GTAAAACCGA AAAAATTACA GGAAAAGAAA GGAGAGCACT AA
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Protein sequence | MEKNKKRRNL INAVIAFAAI ILGYMAVYFM MEGNILSRQM TSLIPRIGIN IILAVSLSIT VGLLGELSLG HAGFMAIGAY SSAIFTTQAV GLPGFLSFII ALLIGGIMAA LFGVITGIPV LRLRGDYLAI VTLAFTEIIR SIINSMSITG GAMGLSKIPD YANYTWIYIF GILTILVAVN LKNSRHGRAI LSVRENYVAA EAMGIPVTKF KILAFTIAAF FAGIAGALYA HTYSVLRPNS FDYNKSIDIL IFVVLGGMGN IPGTIVATIL LTYLPEKFRE FGDYRMLTYA LALIIIMILN SGEMKEKIKG FFGKIVPFGK VKPKKLQEKK GEH
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