Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3533 |
Symbol | |
ID | 5743645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4362683 |
End bp | 4363441 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641294644 |
Product | ABC transporter related |
Protein accession | YP_001560621 |
Protein GI | 160881653 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.594682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAT TGGAAGTAAA GAATTTAGGT ATCTCCTTTG GTGGTTTAAG AGCAGTAGAC CAAGTTAAAT TTTCTATCAA GGAAGGTCAA TTATATGGAT TAATTGGACC AAACGGAGCT GGGAAAACTA CCCTATTTAA TTTATTAACT GGAGTATACC AACCAACAGA TGGTAGTATT ATATTAGAGG GTATGAGATT AAATGGAAAG AAACCGGTTC AAATTAACCA AGCCGGAATC GCAAGAACAT TTCAAAATAT ACGATTGTTT AAAAAGATGA CAGTACTTGA TAATGTAAAA GTAGCCTTAC ACAATCAGGT ACACTACTCC TTATTCCAGG CATTATTTAA ACTTCCGTCG TATTGGAAGA AAGAAAAGCA AATGGATAAG ATGGCACTTG AGATCCTTGA GGTATTTGAC CTTGATAAGC AAGCGGAGGT TTTAGCTTCT AATCTTCCTT ATGGTAAGCA ACGTAAATTA GAAATTGCGA GAGCACTAGC TACAAATCCA AAGCTACTGC TTCTTGATGA GCCAGCAGCA GGTATGAATC CGAATGAAAC AGAAGAGCTG ATGCGAACAA TTCGTTTAGT AAGAGACCGT TATAAAATAA CTATTCTTTT AATTGAGCAT GATATGAAAC TTGTGACAGG TATCTGTGAG GAGATATTGG TACTAAACTT CGGTATGGAA TTATCAAAAG GAACACCGTC TGAGGTTTTA AATAACCCTG AAGTTATTAC CGCATATCTT GGCGAATGA
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Protein sequence | MALLEVKNLG ISFGGLRAVD QVKFSIKEGQ LYGLIGPNGA GKTTLFNLLT GVYQPTDGSI ILEGMRLNGK KPVQINQAGI ARTFQNIRLF KKMTVLDNVK VALHNQVHYS LFQALFKLPS YWKKEKQMDK MALEILEVFD LDKQAEVLAS NLPYGKQRKL EIARALATNP KLLLLDEPAA GMNPNETEEL MRTIRLVRDR YKITILLIEH DMKLVTGICE EILVLNFGME LSKGTPSEVL NNPEVITAYL GE
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