Gene Cphy_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3533 
Symbol 
ID5743645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4362683 
End bp4363441 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content36% 
IMG OID641294644 
ProductABC transporter related 
Protein accessionYP_001560621 
Protein GI160881653 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.594682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAT TGGAAGTAAA GAATTTAGGT ATCTCCTTTG GTGGTTTAAG AGCAGTAGAC 
CAAGTTAAAT TTTCTATCAA GGAAGGTCAA TTATATGGAT TAATTGGACC AAACGGAGCT
GGGAAAACTA CCCTATTTAA TTTATTAACT GGAGTATACC AACCAACAGA TGGTAGTATT
ATATTAGAGG GTATGAGATT AAATGGAAAG AAACCGGTTC AAATTAACCA AGCCGGAATC
GCAAGAACAT TTCAAAATAT ACGATTGTTT AAAAAGATGA CAGTACTTGA TAATGTAAAA
GTAGCCTTAC ACAATCAGGT ACACTACTCC TTATTCCAGG CATTATTTAA ACTTCCGTCG
TATTGGAAGA AAGAAAAGCA AATGGATAAG ATGGCACTTG AGATCCTTGA GGTATTTGAC
CTTGATAAGC AAGCGGAGGT TTTAGCTTCT AATCTTCCTT ATGGTAAGCA ACGTAAATTA
GAAATTGCGA GAGCACTAGC TACAAATCCA AAGCTACTGC TTCTTGATGA GCCAGCAGCA
GGTATGAATC CGAATGAAAC AGAAGAGCTG ATGCGAACAA TTCGTTTAGT AAGAGACCGT
TATAAAATAA CTATTCTTTT AATTGAGCAT GATATGAAAC TTGTGACAGG TATCTGTGAG
GAGATATTGG TACTAAACTT CGGTATGGAA TTATCAAAAG GAACACCGTC TGAGGTTTTA
AATAACCCTG AAGTTATTAC CGCATATCTT GGCGAATGA
 
Protein sequence
MALLEVKNLG ISFGGLRAVD QVKFSIKEGQ LYGLIGPNGA GKTTLFNLLT GVYQPTDGSI 
ILEGMRLNGK KPVQINQAGI ARTFQNIRLF KKMTVLDNVK VALHNQVHYS LFQALFKLPS
YWKKEKQMDK MALEILEVFD LDKQAEVLAS NLPYGKQRKL EIARALATNP KLLLLDEPAA
GMNPNETEEL MRTIRLVRDR YKITILLIEH DMKLVTGICE EILVLNFGME LSKGTPSEVL
NNPEVITAYL GE