Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3532 |
Symbol | |
ID | 5743644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4361951 |
End bp | 4362661 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641294643 |
Product | ABC transporter related |
Protein accession | YP_001560620 |
Protein GI | 160881652 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.10442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATGT TGACAATAAA TGATTTAGAT GTATACTATG GAGTAATTCA AGCAATTAAG GGTGTCTCCT TCACAGTAAA TGAAGGAGAA GTTATTGCTT TGATTGGTGC CAATGGAGCT GGTAAGACCA CAATCCTACA TACGATTACT GGCTTAGTGA CTCCTAAACA TGGCAGTATC GATTTTGAAG GACACAATTT ATTAAAAACA CCAGCACATA AGATTGTTTC GCTTGGTATG GCACATGTAC CGGAAGGCCG AAGAATCTTT GCAGAGCTTA CGGTATTTGA GAATCTTATG ATGGGTGCTT ATAGTAGAAA AGATAATGCA GAGATTTCGA AAACCTTGAC AGAAGTGTAT CAGCGTTTTC CAAGACTAGC TGAACGTAAA AAACAAATTG CCGGAACTTT ATCCGGAGGG GAGCAGCAAA TGCTTGCTAT GGGGCGTGCA CTCATGTCTA AGCCAAAAAT TATGTTATTA GACGAACCTT CCATGGGGTT ATCCCCTTTA TTTGTTTCAG AAATATTTCA TATCATACAA GAGATAAGTA AGAATGGAAC TACAGTATTA TTGGTAGAAC AGAATGCAAA AAAAGCTCTT TCTATTGCCA ATAGAGCTTA TGTACTGGAA ACTGGTAAAA TTGTTTTATC TGGTGATGCG AATGAGATGA TGAATAATGA CTCTGTTAAA AAAGCTTACC TAGGAGAATA A
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Protein sequence | MAMLTINDLD VYYGVIQAIK GVSFTVNEGE VIALIGANGA GKTTILHTIT GLVTPKHGSI DFEGHNLLKT PAHKIVSLGM AHVPEGRRIF AELTVFENLM MGAYSRKDNA EISKTLTEVY QRFPRLAERK KQIAGTLSGG EQQMLAMGRA LMSKPKIMLL DEPSMGLSPL FVSEIFHIIQ EISKNGTTVL LVEQNAKKAL SIANRAYVLE TGKIVLSGDA NEMMNNDSVK KAYLGE
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