Gene Cphy_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3516 
Symbol 
ID5743627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4341214 
End bp4343979 
Gene Length2766 bp 
Protein Length921 aa 
Translation table11 
GC content35% 
IMG OID641294626 
Producthypothetical protein 
Protein accessionYP_001560604 
Protein GI160881636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT TACGTGTACC TTGTTTATTG CAAGCAATAT TATCGAAAGC TATAATATTG 
CTTGTAATAA TTTCATTGTC TATAGTCATG TTATTGCCAT GTAAAATGGT TGATGCAACT
GCAGCAAGGG CTCCGCAAAC GAATGTAGGA AATACCGATC AAAGTGGGAA ACCAATCATT
TTAGCCAATG ACCGTGTCGT AGTTACGTTA CAATATGGGT TTGAGCAACA AGCTAGATAT
GGTAGAACCA TACAGGTAAC TGCAAAAATC TATAACAAAG GTGAAAGTTT TACTGGTGAA
ATAGCTGCCA CTATAATGAA TGAAGAACAA GATAATATTC GTTATGCTAC TACAGCGACA
ATTCTAGGAT TAGAAAAAAA TGTCGTAACG TTAAATATTC CTATGAACAG AGCCAGTAAA
AGCATGAAAT TTGAGCTTCT ATCTTCCAGT AAGGATACAA TTGTAGAAGA GGTAATCCCT
CTTAATGTCG TTAACTTAGG AACCTATTAT TACGTAGGTA TTTTAAGTGA TATGTCGACT
CCGCTGTCTT ATTTTGAGTA TTTTGGGAAT AAGTGTGTTT ACTTGGATAA AAGTAATTTT
CCAAGTGATT ATTTTGGACT TGATATGATA GATGTGTTGG TAATTGAAAA TTTTAAGATA
TCTAGTCTAA CCGAGGAACA GCAACAAGCA ATACTAGGGT TTGTGAAACG TGGTGGTACG
CTGGTTTTTG GAAGTGAGGC TTACTACGAG GATGGTATAC CTGCAATTAA GTGGCTTAGT
AATCAAAATA TAGTAAGTCT TGAAGAAGAA ACTTCCGATT TTTCAGTGCA GAATGCAAAG
ATATCCATGA AAGAGCCTTC TGAATTTTCA GATCTTTTAT TAAGGGTGAA GGGATATGAA
ACATTACGAG CTTCTAACTT AAAATATAAA GAGGATATAA AAAACAAAGA GCCACAGAAA
GATTGTAACT TATATATTGG AAAATCTATT TTAGGTAATA AAATTATTAG CGACTTAAAG
TTTACTTCGG TTGAAAAGAC TGTTACTGTA TTTTCTACCA CGAATGCTAC AAAAAAGAAG
GAATCTAACA ATCTTACTAT CTATGAGAAG GTGCCATATG GAGAAGGTAA TGTTTTGGTA
TTTCATTTTC CACTGGGTAT GGAGGGATTG ACGGAAGCAA AGATTTTAGT GAATGATGGG
GTAAGTGGAA AGATATTGAA TACCTTTTAT CTTTCCGTGG TTTCGCAAGT GCTTGAAGAC
ATACCCGCTG CTGTAAAGAA ACATTTGGAG GTTGAGCAAT ATGCGAACTT CGATAATTAC
AGAGTCCAGG GAATTATAAA TAACTCTAAT TCTATTGATG TTCCGAAAGT GTTTCCTTAT
ACGATTTTAT TAGTGGTCTA TATTGTTATC ATTGGACCTC TCCTATACTT TATACTTCAT
AAAAAGAAGA AGAATATCCT AGTCTGGGTG TTAGTTCCTT GTCTCTCTCT TGTATTTTCT
TGCATTGTAT ATGTGATGGG AACCAATACA AGAATTACAG AGCCGTATAT TTCTTATTTT
AATGTAGAGA CTTATGACCC TAATACTAAA ACGCTTGAGG CCGAATCCAA TGTAAATGTA
TATTTATCCT CCAACCAAAA GACGGAGCTA AGTCTTGGGG ATGCAAATGA GGTCATTGCG
GGAAAGTATC AGTATCCAAC CTTTTATGAT GTAATTGATA AAGAGAAACC ATATGATACT
CTGAGCTTTG GTGAGGCAGT CAATACTTCA GTGTTAAAAT CGAAAGATAG CTATTCCTTG
ATGTTTGACC ATATACCAGC ATTCACTCCT CAGTATTTTT CTCTAGATTA CTCCAGAGAA
TTAGATGATG AAGTAACAGG TCAGGTTTCG GTTACAGAAA GTACTATGAG TGGTAGTGTA
ACAAATGATA CTTCGGAAAA TTTTGAAGAA GCATATGTTT ATTATAATGG TAGAGTTGCT
TTGCTTGGAG ATTTAGAAAG CGGTGAGAGT GCTTCCCTTG AGGAATGTAG CCAAGAATAC
AATTTTAATA TTTATAGTAT TTTGTATAAT TCAAATTCGA TTAGTGTAGA GCTTGGTAAT
CAAGAAACTA AGATATCACC GGATCGTGTA AGAAAAAATA ATGCACTTAG CATGGTGATT
GAAGAGGGAC TTTATGCGAA AGAAGGAGCA TATCTTATCG GGTTTATAGA TAGTTTACCT
AAGGAACATC CATTTTCATC TTTATCTAAC AATCGTGCTA GCTATGGAGT TTCTATGATG
GTAGTTCCTT TGGAACTTAA TACAACAACC GGTGATGTGA CTTTAGTTCC AAACCTTGAT
CGCTATCTAA AGGCAGGTGG GAGCAACTAT TATGATAATG CGCTTCGCTA TGTTTATACG
AATAGCATTG AATTAGAGTA TCAGCTACCA AAAGAAGATG AAATTTCAAA GCTAGTACTG
GCAGATGTTT TTCAACTTAG CTTAAATCAA GATACAAATT ATTATTTATT GGCAAAGAAG
ATATATTTCT ACAATAGAAC TACCAGCCAG TATGATTTGG TATTTCGATC TGATTTATTA
CAGGATGGTA GATATCAGAA GGTGAATGCT GAAGATGGTG AGGGAGATGC TTCTTTAAGC
GCAGAAGAAC TAAAGGATTA TCTAAGTAAG GAGCATGAAT TAAAGATTAA GTATGAAGGA
GAAGAAGTCG AGATGAGTGG TGTATTCACT ATTCCGGTTA TCTCCTACAT AAAGATGGCT
AATTAA
 
Protein sequence
MKHLRVPCLL QAILSKAIIL LVIISLSIVM LLPCKMVDAT AARAPQTNVG NTDQSGKPII 
LANDRVVVTL QYGFEQQARY GRTIQVTAKI YNKGESFTGE IAATIMNEEQ DNIRYATTAT
ILGLEKNVVT LNIPMNRASK SMKFELLSSS KDTIVEEVIP LNVVNLGTYY YVGILSDMST
PLSYFEYFGN KCVYLDKSNF PSDYFGLDMI DVLVIENFKI SSLTEEQQQA ILGFVKRGGT
LVFGSEAYYE DGIPAIKWLS NQNIVSLEEE TSDFSVQNAK ISMKEPSEFS DLLLRVKGYE
TLRASNLKYK EDIKNKEPQK DCNLYIGKSI LGNKIISDLK FTSVEKTVTV FSTTNATKKK
ESNNLTIYEK VPYGEGNVLV FHFPLGMEGL TEAKILVNDG VSGKILNTFY LSVVSQVLED
IPAAVKKHLE VEQYANFDNY RVQGIINNSN SIDVPKVFPY TILLVVYIVI IGPLLYFILH
KKKKNILVWV LVPCLSLVFS CIVYVMGTNT RITEPYISYF NVETYDPNTK TLEAESNVNV
YLSSNQKTEL SLGDANEVIA GKYQYPTFYD VIDKEKPYDT LSFGEAVNTS VLKSKDSYSL
MFDHIPAFTP QYFSLDYSRE LDDEVTGQVS VTESTMSGSV TNDTSENFEE AYVYYNGRVA
LLGDLESGES ASLEECSQEY NFNIYSILYN SNSISVELGN QETKISPDRV RKNNALSMVI
EEGLYAKEGA YLIGFIDSLP KEHPFSSLSN NRASYGVSMM VVPLELNTTT GDVTLVPNLD
RYLKAGGSNY YDNALRYVYT NSIELEYQLP KEDEISKLVL ADVFQLSLNQ DTNYYLLAKK
IYFYNRTTSQ YDLVFRSDLL QDGRYQKVNA EDGEGDASLS AEELKDYLSK EHELKIKYEG
EEVEMSGVFT IPVISYIKMA N