Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3516 |
Symbol | |
ID | 5743627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4341214 |
End bp | 4343979 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641294626 |
Product | hypothetical protein |
Protein accession | YP_001560604 |
Protein GI | 160881636 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATT TACGTGTACC TTGTTTATTG CAAGCAATAT TATCGAAAGC TATAATATTG CTTGTAATAA TTTCATTGTC TATAGTCATG TTATTGCCAT GTAAAATGGT TGATGCAACT GCAGCAAGGG CTCCGCAAAC GAATGTAGGA AATACCGATC AAAGTGGGAA ACCAATCATT TTAGCCAATG ACCGTGTCGT AGTTACGTTA CAATATGGGT TTGAGCAACA AGCTAGATAT GGTAGAACCA TACAGGTAAC TGCAAAAATC TATAACAAAG GTGAAAGTTT TACTGGTGAA ATAGCTGCCA CTATAATGAA TGAAGAACAA GATAATATTC GTTATGCTAC TACAGCGACA ATTCTAGGAT TAGAAAAAAA TGTCGTAACG TTAAATATTC CTATGAACAG AGCCAGTAAA AGCATGAAAT TTGAGCTTCT ATCTTCCAGT AAGGATACAA TTGTAGAAGA GGTAATCCCT CTTAATGTCG TTAACTTAGG AACCTATTAT TACGTAGGTA TTTTAAGTGA TATGTCGACT CCGCTGTCTT ATTTTGAGTA TTTTGGGAAT AAGTGTGTTT ACTTGGATAA AAGTAATTTT CCAAGTGATT ATTTTGGACT TGATATGATA GATGTGTTGG TAATTGAAAA TTTTAAGATA TCTAGTCTAA CCGAGGAACA GCAACAAGCA ATACTAGGGT TTGTGAAACG TGGTGGTACG CTGGTTTTTG GAAGTGAGGC TTACTACGAG GATGGTATAC CTGCAATTAA GTGGCTTAGT AATCAAAATA TAGTAAGTCT TGAAGAAGAA ACTTCCGATT TTTCAGTGCA GAATGCAAAG ATATCCATGA AAGAGCCTTC TGAATTTTCA GATCTTTTAT TAAGGGTGAA GGGATATGAA ACATTACGAG CTTCTAACTT AAAATATAAA GAGGATATAA AAAACAAAGA GCCACAGAAA GATTGTAACT TATATATTGG AAAATCTATT TTAGGTAATA AAATTATTAG CGACTTAAAG TTTACTTCGG TTGAAAAGAC TGTTACTGTA TTTTCTACCA CGAATGCTAC AAAAAAGAAG GAATCTAACA ATCTTACTAT CTATGAGAAG GTGCCATATG GAGAAGGTAA TGTTTTGGTA TTTCATTTTC CACTGGGTAT GGAGGGATTG ACGGAAGCAA AGATTTTAGT GAATGATGGG GTAAGTGGAA AGATATTGAA TACCTTTTAT CTTTCCGTGG TTTCGCAAGT GCTTGAAGAC ATACCCGCTG CTGTAAAGAA ACATTTGGAG GTTGAGCAAT ATGCGAACTT CGATAATTAC AGAGTCCAGG GAATTATAAA TAACTCTAAT TCTATTGATG TTCCGAAAGT GTTTCCTTAT ACGATTTTAT TAGTGGTCTA TATTGTTATC ATTGGACCTC TCCTATACTT TATACTTCAT AAAAAGAAGA AGAATATCCT AGTCTGGGTG TTAGTTCCTT GTCTCTCTCT TGTATTTTCT TGCATTGTAT ATGTGATGGG AACCAATACA AGAATTACAG AGCCGTATAT TTCTTATTTT AATGTAGAGA CTTATGACCC TAATACTAAA ACGCTTGAGG CCGAATCCAA TGTAAATGTA TATTTATCCT CCAACCAAAA GACGGAGCTA AGTCTTGGGG ATGCAAATGA GGTCATTGCG GGAAAGTATC AGTATCCAAC CTTTTATGAT GTAATTGATA AAGAGAAACC ATATGATACT CTGAGCTTTG GTGAGGCAGT CAATACTTCA GTGTTAAAAT CGAAAGATAG CTATTCCTTG ATGTTTGACC ATATACCAGC ATTCACTCCT CAGTATTTTT CTCTAGATTA CTCCAGAGAA TTAGATGATG AAGTAACAGG TCAGGTTTCG GTTACAGAAA GTACTATGAG TGGTAGTGTA ACAAATGATA CTTCGGAAAA TTTTGAAGAA GCATATGTTT ATTATAATGG TAGAGTTGCT TTGCTTGGAG ATTTAGAAAG CGGTGAGAGT GCTTCCCTTG AGGAATGTAG CCAAGAATAC AATTTTAATA TTTATAGTAT TTTGTATAAT TCAAATTCGA TTAGTGTAGA GCTTGGTAAT CAAGAAACTA AGATATCACC GGATCGTGTA AGAAAAAATA ATGCACTTAG CATGGTGATT GAAGAGGGAC TTTATGCGAA AGAAGGAGCA TATCTTATCG GGTTTATAGA TAGTTTACCT AAGGAACATC CATTTTCATC TTTATCTAAC AATCGTGCTA GCTATGGAGT TTCTATGATG GTAGTTCCTT TGGAACTTAA TACAACAACC GGTGATGTGA CTTTAGTTCC AAACCTTGAT CGCTATCTAA AGGCAGGTGG GAGCAACTAT TATGATAATG CGCTTCGCTA TGTTTATACG AATAGCATTG AATTAGAGTA TCAGCTACCA AAAGAAGATG AAATTTCAAA GCTAGTACTG GCAGATGTTT TTCAACTTAG CTTAAATCAA GATACAAATT ATTATTTATT GGCAAAGAAG ATATATTTCT ACAATAGAAC TACCAGCCAG TATGATTTGG TATTTCGATC TGATTTATTA CAGGATGGTA GATATCAGAA GGTGAATGCT GAAGATGGTG AGGGAGATGC TTCTTTAAGC GCAGAAGAAC TAAAGGATTA TCTAAGTAAG GAGCATGAAT TAAAGATTAA GTATGAAGGA GAAGAAGTCG AGATGAGTGG TGTATTCACT ATTCCGGTTA TCTCCTACAT AAAGATGGCT AATTAA
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Protein sequence | MKHLRVPCLL QAILSKAIIL LVIISLSIVM LLPCKMVDAT AARAPQTNVG NTDQSGKPII LANDRVVVTL QYGFEQQARY GRTIQVTAKI YNKGESFTGE IAATIMNEEQ DNIRYATTAT ILGLEKNVVT LNIPMNRASK SMKFELLSSS KDTIVEEVIP LNVVNLGTYY YVGILSDMST PLSYFEYFGN KCVYLDKSNF PSDYFGLDMI DVLVIENFKI SSLTEEQQQA ILGFVKRGGT LVFGSEAYYE DGIPAIKWLS NQNIVSLEEE TSDFSVQNAK ISMKEPSEFS DLLLRVKGYE TLRASNLKYK EDIKNKEPQK DCNLYIGKSI LGNKIISDLK FTSVEKTVTV FSTTNATKKK ESNNLTIYEK VPYGEGNVLV FHFPLGMEGL TEAKILVNDG VSGKILNTFY LSVVSQVLED IPAAVKKHLE VEQYANFDNY RVQGIINNSN SIDVPKVFPY TILLVVYIVI IGPLLYFILH KKKKNILVWV LVPCLSLVFS CIVYVMGTNT RITEPYISYF NVETYDPNTK TLEAESNVNV YLSSNQKTEL SLGDANEVIA GKYQYPTFYD VIDKEKPYDT LSFGEAVNTS VLKSKDSYSL MFDHIPAFTP QYFSLDYSRE LDDEVTGQVS VTESTMSGSV TNDTSENFEE AYVYYNGRVA LLGDLESGES ASLEECSQEY NFNIYSILYN SNSISVELGN QETKISPDRV RKNNALSMVI EEGLYAKEGA YLIGFIDSLP KEHPFSSLSN NRASYGVSMM VVPLELNTTT GDVTLVPNLD RYLKAGGSNY YDNALRYVYT NSIELEYQLP KEDEISKLVL ADVFQLSLNQ DTNYYLLAKK IYFYNRTTSQ YDLVFRSDLL QDGRYQKVNA EDGEGDASLS AEELKDYLSK EHELKIKYEG EEVEMSGVFT IPVISYIKMA N
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