| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3508 |
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| Symbol | |
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| ID | 5743619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4327062 |
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| End bp | 4328393 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641294618 |
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| Product | integrase family protein |
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| Protein accession | YP_001560596 |
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| Protein GI | 160881628 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAG GAGTTGAAAA AGTACAGATG AGAAAAAAAG AAGAATTAAA AAAAATGGAA
AGAAAATTAG GTGTGGAAAG TCTGCAAGGT AATAAGGAGG TACTGAACAA GAAAGAAAGC
AAGAAAGAAA TTAAGAAAGA ACAGAATGAA AAAAAGTCAT TGAATTTGCC TAAGGGAATT
ACTAGGTGTT CTGACGGCCG TTATCAAGCT AGATATACTT ATGAGGGACA TCGATATTGT
TTATATGGTA GAGATGTAAA AGAACTTGAG GAAAGACTAA ATAATGCAAA ATATGAGATA
CAACATGGTA TCTACGCAAA GGAAGAAAGA ATTTCATTAA ATGCTTGGTA TGAGACATGG
ATAAATGAGT ACAAGTCAAT GACAGTGAAA CAGGGTACAG TGGAGAGTTA CGAGTGTATG
TATCTTTATT ATGTGAAACC AGAATTAGGT AAGAGATTAA TAAAAGATAT TCGTGGAGAG
CATATTCAGA AATTGTATAA TGATCTATCC AGAAATGGTT ATTCGAAATC TACAATTTCA
CTTATTCATG TTCTGCTTGG TGCTATGTTT AAGCAAGCCC TAAAGAATGA ATTAATTAAA
AAGAATCCAG TTGATTTTAC AACTTTACCT AGAGCAGAAA GGAAGAAAGA AAGAAGAGTA
CTTACATTAA AGGAACAAGA GATATTATTA AAAGAAATTA CAGGGCATGA ATTAGAGCCA
GTAGTACGCT TATCATTAGC TACAGGGCTA AGGGTTGGAG AGGTTACAGG TTTAGAATGG
TGTGATGTTG ATTTTAATAA AAAAGAGGTA ACTGTCCGTG GAACATTAAA GTGTACAAGG
AAGGGTATGG AATATTATAA GGATACACCC AAAACAGATA AAAGTACTCG GAGCATTCCA
CTATTAGACA ATATGGAATT GATGTTAAAG AGATATCGAA TTATTCAAAA GGAACATAAG
CTTTCAATGG GGATTGATTG GAAACCGATA GAAGGACTAG AAGACTTGGT TTTCTTGAGA
GAAGATGGCA AACCATTCTC GGGTCAGCAT ATTAGACAGC AACTTGTTCA TATTGTGGAT
GGTATTAATG AGAAGTATTA TTCAAAGAAG TCAATTAGAC AAGAGAAACT CCTGGAAGAG
AAGTTTGATT ATTTTACACC CCATGCTTTA CGTCATACTT TTGCGACGAG AGCTCTTGAG
AATGGTATTC CACCAAAGGT TGTTCAGGAG ATATTAGGGC ATAGCAGTAT TACAATGACG
TTGGATTTGT ATACGCATGT TTTACCGCAG ACCAAAGCGC AAGAGATGAA AAAATTAGAA
TCGCTAATCT AA
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| Protein sequence | MEEGVEKVQM RKKEELKKME RKLGVESLQG NKEVLNKKES KKEIKKEQNE KKSLNLPKGI
TRCSDGRYQA RYTYEGHRYC LYGRDVKELE ERLNNAKYEI QHGIYAKEER ISLNAWYETW
INEYKSMTVK QGTVESYECM YLYYVKPELG KRLIKDIRGE HIQKLYNDLS RNGYSKSTIS
LIHVLLGAMF KQALKNELIK KNPVDFTTLP RAERKKERRV LTLKEQEILL KEITGHELEP
VVRLSLATGL RVGEVTGLEW CDVDFNKKEV TVRGTLKCTR KGMEYYKDTP KTDKSTRSIP
LLDNMELMLK RYRIIQKEHK LSMGIDWKPI EGLEDLVFLR EDGKPFSGQH IRQQLVHIVD
GINEKYYSKK SIRQEKLLEE KFDYFTPHAL RHTFATRALE NGIPPKVVQE ILGHSSITMT
LDLYTHVLPQ TKAQEMKKLE SLI
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