| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3507 |
|---|
| Symbol | |
|---|
| ID | 5743618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4325737 |
|---|
| End bp | 4326372 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641294617 |
|---|
| Product | sugar transferase |
|---|
| Protein accession | YP_001560595 |
|---|
| Protein GI | 160881627 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTATT TGAAAATTAA AAGATTAATG GATTCTATTA TTTCATTAAT AGCACTTATA
TTATTATCTC CATTATTCTT GATTTTAATA ATTGCTATTA AAATTGATTC AAGAGGACCA
GTTTTATTTA AGCAGAAAAG AGTTGGTAGA CATAAAAGCT ATTTTAATAT ATTAAAGTTT
CGAACTATGA GGATAGATAC TCCAAAGGAT ACTCCTACAC ATATGTTAGA AAATCCAGAT
TATTGGATTA CAAGAGTTGG TAAGTTCTTA AGAAAAACAA GTTTAGATGA GTTACCACAA
ATTTTTAACA TAATTAAAGG TGATATGAGT ATTATTGGAC CTAGGCCAGC ACTCTGGAAT
CAATATGATT TAATTGATGA GCGAGATAAA TTTGGTGCTA ATAATATATT ACCGGGACTT
ACTGGATGGG CACAAATTAA TGGAAGAGAT GAACTCCCTA TTGATGTAAA AGCAAAATTA
GATGGTGAGT ATGTTAATAA AATTGGGTTT TCAATGGATG TGAAATGCTT CTTTGGAACA
TTTATAGCAG TTTTAAAAAG AGATGGCGTT GTTGAAGGTG GAACAGGAAC ATTAGGGCAT
CGAAAAACTG TTAATAAGGA GACGGCTGGA CAATGA
|
|---|
| Protein sequence | MFYLKIKRLM DSIISLIALI LLSPLFLILI IAIKIDSRGP VLFKQKRVGR HKSYFNILKF
RTMRIDTPKD TPTHMLENPD YWITRVGKFL RKTSLDELPQ IFNIIKGDMS IIGPRPALWN
QYDLIDERDK FGANNILPGL TGWAQINGRD ELPIDVKAKL DGEYVNKIGF SMDVKCFFGT
FIAVLKRDGV VEGGTGTLGH RKTVNKETAG Q
|
|---|
| |