Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3504 |
Symbol | |
ID | 5743615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4322606 |
End bp | 4323628 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641294614 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_001560592 |
Protein GI | 160881624 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAG AAAAAACTTT ATTAATAACT GGTGGAACAG GCTCCTTTGG TAATGCTGTG CTTGAGAGAT TTCTTAATAC CGACATAAAA GAGATTCGCA TATTCTCTAG AGATGAAAAG AAACAAGATG ATATGCGACA TAAATATAAT AATGATAAAA TTAAATATTA CATAGGAGAT GTCAGGGATT TACAAAGCAT TAAAAATGCT ATGCATGGTG TTGATTATGT TTTTCAAGCT GCAGCTTTAA AGCAAGTACC ATCATGCGAA TTTTTTCCGA TGGAAGCAGT AAAGACTAAC ATCATAGGTA CAGACAATGT ATTAACAGCT TGTATAGAAG AGGGAGTGAA AAAGGTAATC TGTTTATCCA CAGATAAAGC AGCTTATCCT GTCAATGCCA TGGGGACGTC GAAGGCTATG ATGGAAAAGG TTTTTGTAGC GAAGTCGAGA ACAGTAGATC CAAACAAAAC GTTAATATGT GGAACTCGTT ATGGTAATGT AATGTGCTCA AGGGGATCTG TAATACCATT ATTTATAGAA CAAATAAAAG CTGGACAACC ACTTACTGTG ACAGAACCCA CAATGACTCG ATTTATTATG AGCTTAGAAG AGGCTGTTGA GTTGGTTATA TTCGCTTTTC ACCATGCTGA AAGTGGAGAT ATTATGGTTC AAAAGGCACC GGCAACAACT ATCGGAGTCT TGGCTCAAGC AATAAAAGAA TTGTTTAATG TCGATAACGA AATAAAAACT ATAGGAATAC GCCATGGAGA AAAAATGTAT GAAACATTAT TAACTAATGA AGAGTGTGCA CATGCAATAG ATATGGGCAA CTTTTATCGT GTTCCTGCAG ATAAACGAGA TTTAAATTAT GATAAGTATT TTAAAGTTGG AGATCAAGGA AGAGAAAAAT TATCTGAATT TAATTCTAAT AATACGCAGC TACTTACTAT AGAACAGACG AAAGAAAAAT TATTAACATT ATCCTATATA AGAGAAGAAA TAGAAGCTTG GGAGAACCGA TAA
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Protein sequence | MFKEKTLLIT GGTGSFGNAV LERFLNTDIK EIRIFSRDEK KQDDMRHKYN NDKIKYYIGD VRDLQSIKNA MHGVDYVFQA AALKQVPSCE FFPMEAVKTN IIGTDNVLTA CIEEGVKKVI CLSTDKAAYP VNAMGTSKAM MEKVFVAKSR TVDPNKTLIC GTRYGNVMCS RGSVIPLFIE QIKAGQPLTV TEPTMTRFIM SLEEAVELVI FAFHHAESGD IMVQKAPATT IGVLAQAIKE LFNVDNEIKT IGIRHGEKMY ETLLTNEECA HAIDMGNFYR VPADKRDLNY DKYFKVGDQG REKLSEFNSN NTQLLTIEQT KEKLLTLSYI REEIEAWENR
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