Gene Cphy_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3502 
Symbol 
ID5743613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp4320368 
End bp4321492 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content31% 
IMG OID641294612 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001560590 
Protein GI160881622 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAC TTAAAGTAAT GACGGTGGTT GGTACTAGAC CGGAGATTAT AAGATTGTCA 
GCAGTTATAA ATAAATTGGA AGAATCTGAA GCTATTGAAC ATATACTTGT TCATACAGGA 
CAAAATTATG ATTATGAATT AAACGAGGTT TTCTTTAATG ATTTTAAACT TAAAAAGCCT 
GATTTTTTTC TAAATGCAGC AACAGGAACT GCAGTAGAAA CGATAGGCAA CATTCTAATA 
AAGATTGATT CGATACTTGA AAAAGTAAAT CCAGAAGCGC TGCTGGTACT TGGAGACACT 
AATAGTTGTC TATGTGCTAT TTCTGCAAAA AGGAGACATA TACCAATATT TCATATGGAA 
GCAGGTAATA GATGTTTTGA TCAAAGAGTG CCAGAAGAGA CTAATCGAAA AATCGTAGAT 
CATATATCAG ACATTAATAT GCCATATAGT GATATTGCAA GAGAATATTT AATCAAAGAA 
GGCTTACCAG CAGATAGAAT AGTAAAGACT GGAAGCCCAA TGTATGAAGT TATACAATCA 
AGAATAGAAG ATATTGAAAA ATCAGATATA TTAGAAAGAT TAGAACTCTC AGAAGGAAAG 
TTTTTTGTTG TATCGTCTCA CCGAGAAGAA AATATTAATT CTGAAGAGAA CTTTTTCGAG 
TTAGTTAATA GTATTAATTC AATAGCAGAA AAATACAAAT TACCTGTAAT AATAAGTACT 
CATCCAAGAA CTAGAAAGAT GATAGAATCA AAGGGAGTAG TATTTAATTC ACTTGTTAAT 
ACAATGAAAC CTTTAGGATT CAATGATTAT ATTAAATTGC AAATAAAAGC TAAAGCAGTC 
CTAAGTGATA GTGGGACAAT AAGTGAAGAA TCATCTATTC TTGGTTTTAA GGCACTAAAT 
ATTAGACAAA ATCATGAAAG ACCTGAAGCT ATGGAAGAGG CTTCAGTTAT GATGGTAGGT 
CTAGGTAAAG ATAGAATATT ACAAGGACTT GAAGTTTTGG AAGCACAGGA AAAAAATATT 
TTGAGACAAG TATCTGATTA TTGCATGCCT AATGTTTCGG ATAAAGTATT AAGAATTATA 
CTGTCATATA CAGATTATGT TAATAGATTT GTTTGGAGGA AATGA
 
Protein sequence
MRKLKVMTVV GTRPEIIRLS AVINKLEESE AIEHILVHTG QNYDYELNEV FFNDFKLKKP 
DFFLNAATGT AVETIGNILI KIDSILEKVN PEALLVLGDT NSCLCAISAK RRHIPIFHME 
AGNRCFDQRV PEETNRKIVD HISDINMPYS DIAREYLIKE GLPADRIVKT GSPMYEVIQS 
RIEDIEKSDI LERLELSEGK FFVVSSHREE NINSEENFFE LVNSINSIAE KYKLPVIIST 
HPRTRKMIES KGVVFNSLVN TMKPLGFNDY IKLQIKAKAV LSDSGTISEE SSILGFKALN 
IRQNHERPEA MEEASVMMVG LGKDRILQGL EVLEAQEKNI LRQVSDYCMP NVSDKVLRII 
LSYTDYVNRF VWRK