| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3485 |
|---|
| Symbol | |
|---|
| ID | 5743597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4298475 |
|---|
| End bp | 4299581 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641294597 |
|---|
| Product | peptidase T-like protein |
|---|
| Protein accession | YP_001560575 |
|---|
| Protein GI | 160881607 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2195] Di- and tripeptidases |
|---|
| TIGRFAM ID | [TIGR01883] peptidase T-like protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000911364 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAAG AACGTATCGT AAAGGAATTT TGTAAATTAG TTGAGATTGA CTCTCCCTCA
TTTGGGGAAC GGGAAATAGC AGATCAGCTA AAAGCTTATC TTGTGGAACT AGGATTTGAG
GTTAGGGAAG ATAAGGCGGG GGATTGTTAT AACGGAAACT GCGGTAATAT CTATGGTTTT
TTACAAGGAG AATTGCCGGG AGATCCTATT CTTTTTTCCG CTCATATGGA TACGGTAGAA
CCTTCAAGGA ATAAAAAAGC AGTAGTTCAT GAGGATGGGA GAATCACCAG CGATGGTACT
ACGGTGCTTG GAGCGGATGA TATTTCCGGC ATCGTCGCTA TCCTAGAAGC GATAAGAAAA
ATAAAGGAAC AAGGGGTTCC TCATCGAAGT ATTGAGGTTT TATTTGCGAT AGCGGAGGAA
GTCTATATAT TAGGAAGTGA GGTCCTCGAC TATTCCTTAA TTCGTGCCAA GGAGGCCTAT
GTCCTTGATT TAACCGGAGA AGTTGGGACA GCAGCGCTAA GTGCACCGAC TCTTGTTTCT
TTTACCGCTA AGATGATTGG AAAGGCAGCT CACGCAGGTT TTGCTCCGGA GAATGGGATA
AATGCAATTG CTGCAGTAGC AGATGCTATA GGGCAGGTAA AACAAGGGCG CATTGATGAG
ATTACAACAG TAAACATAGG TACAATTTCT GGCGGTTTGG CAAAAAATAT TGTATCAGAA
GGTTGCATCA TCGAAGGAGA AGCGAGAAGT TTAAATCACG ATAAAGCAGT ACTTGAAGTA
GATAAAATTC AAGGTATTTT TAAAGCTACT GCGGAAAAAT ACGGTGCAGA GTGCGAATTT
AAGACATCCT TTGGTTGTAT CGCATATGAA ATAGACAAAA CCAATCCTGT CGTTATAAAA
TATGAAAAAG CATGCAATAA GCTAGAAATT CCGACTAAAT ATATAAAGAC CTTTGGAGGA
AGTGATAATA ATAATTTCAT TCGCCATGGA ATCACTGGAA TTGTCATAGC ATCTGGAATG
AACAAGGTGC ATTCTACAGA GGAGTATACT TTAGTTTCTG AACTTATTAA GTGCAGTAAA
ATTGTATATG AGTTAATGAC GGTATAA
|
|---|
| Protein sequence | MMEERIVKEF CKLVEIDSPS FGEREIADQL KAYLVELGFE VREDKAGDCY NGNCGNIYGF
LQGELPGDPI LFSAHMDTVE PSRNKKAVVH EDGRITSDGT TVLGADDISG IVAILEAIRK
IKEQGVPHRS IEVLFAIAEE VYILGSEVLD YSLIRAKEAY VLDLTGEVGT AALSAPTLVS
FTAKMIGKAA HAGFAPENGI NAIAAVADAI GQVKQGRIDE ITTVNIGTIS GGLAKNIVSE
GCIIEGEARS LNHDKAVLEV DKIQGIFKAT AEKYGAECEF KTSFGCIAYE IDKTNPVVIK
YEKACNKLEI PTKYIKTFGG SDNNNFIRHG ITGIVIASGM NKVHSTEEYT LVSELIKCSK
IVYELMTV
|
|---|
| |